Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9h07
         (314 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81458-2|CAB03822.1|  386|Caenorhabditis elegans Hypothetical pr...    30   0.40 
U53337-5|AAP40522.1|  377|Caenorhabditis elegans Hypothetical pr...    28   1.6  
U53337-4|AAA96186.2|  636|Caenorhabditis elegans Hypothetical pr...    28   1.6  
U97003-7|AAB52274.1|  357|Caenorhabditis elegans Hypothetical pr...    27   2.8  
U13072-3|AAK31396.4|  326|Caenorhabditis elegans Serpentine rece...    26   5.0  
U23453-9|AAC46755.1|  727|Caenorhabditis elegans Hypothetical pr...    26   6.6  
AL033514-32|CAA22112.1|  344|Caenorhabditis elegans Hypothetical...    26   6.6  
AF022972-11|AAN84825.1|  370|Caenorhabditis elegans Udp-glucuron...    26   6.6  
AF022972-10|AAC48233.2|  523|Caenorhabditis elegans Udp-glucuron...    26   6.6  

>Z81458-2|CAB03822.1|  386|Caenorhabditis elegans Hypothetical
           protein C03E10.3 protein.
          Length = 386

 Score = 29.9 bits (64), Expect = 0.40
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -3

Query: 309 FLNILLFIHSEVLHIIIYTFIIYSFHKHTQQLIF 208
           FLNIL    +++ +I +Y F + SF  +T  + F
Sbjct: 350 FLNILYLSSNQITYIYLYLFFVTSFKLNTSSISF 383


>U53337-5|AAP40522.1|  377|Caenorhabditis elegans Hypothetical
           protein R02E12.2b protein.
          Length = 377

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 285 HSEVLHIIIYTFIIYSFHKHTQQLIFNIPS--FST 187
           H  +  II+Y+ + Y+F  + Q  +F+I S  FST
Sbjct: 166 HDHLAKIILYSDVFYTFFLYVQSEVFDISSDAFST 200


>U53337-4|AAA96186.2|  636|Caenorhabditis elegans Hypothetical
           protein R02E12.2a protein.
          Length = 636

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 285 HSEVLHIIIYTFIIYSFHKHTQQLIFNIPS--FST 187
           H  +  II+Y+ + Y+F  + Q  +F+I S  FST
Sbjct: 425 HDHLAKIILYSDVFYTFFLYVQSEVFDISSDAFST 459


>U97003-7|AAB52274.1|  357|Caenorhabditis elegans Hypothetical
           protein F47C10.4 protein.
          Length = 357

 Score = 27.1 bits (57), Expect = 2.8
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 123 IINVANQKSNCFATWVQQFISQLKRKEY*KLIVGYVYEN 239
           ++ V NQK +  AT ++  + Q  R+E   L+  + YEN
Sbjct: 102 MLEVKNQKDDAVATLIESLLYQDARREK-NLMTHFTYEN 139


>U13072-3|AAK31396.4|  326|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 3 protein.
          Length = 326

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = -1

Query: 143 LICYINNKCCLKYFLSN--TMSGYY 75
           L C++  +CC  YFLS+    S YY
Sbjct: 109 LPCFVFERCCASYFLSDYEKRSRYY 133


>U23453-9|AAC46755.1|  727|Caenorhabditis elegans Hypothetical
           protein B0252.1 protein.
          Length = 727

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 220 LGMFMKTINNKSIYNDMEYFR 282
           LG   KT++N+ I+NDM Y +
Sbjct: 307 LGFLDKTVDNQVIHNDMFYLQ 327


>AL033514-32|CAA22112.1|  344|Caenorhabditis elegans Hypothetical
           protein Y75B8A.34 protein.
          Length = 344

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 300 ILLFIHSEVLHIIIYTFIIYS 238
           I+LFIHS ++ + ++ +II S
Sbjct: 82  IILFIHSSIISLRVFVYIISS 102


>AF022972-11|AAN84825.1|  370|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein39, isoform b
           protein.
          Length = 370

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 88  IVFDKKYFKQHLLLM*QIKNQIVSPR 165
           I+FD  Y K  L L  Q++NQ + P+
Sbjct: 276 ILFDSSYAKNALKLAEQLENQPIKPK 301


>AF022972-10|AAC48233.2|  523|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein39, isoform a
           protein.
          Length = 523

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 88  IVFDKKYFKQHLLLM*QIKNQIVSPR 165
           I+FD  Y K  L L  Q++NQ + P+
Sbjct: 429 ILFDSSYAKNALKLAEQLENQPIKPK 454


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,774,110
Number of Sequences: 27780
Number of extensions: 129162
Number of successful extensions: 267
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 267
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 355337994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)