Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9h07
(314 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 1.2
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 1.2
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 2.0
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 2.7
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 21 4.7
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 21 4.7
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 20 6.2
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 20 6.2
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 20 8.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 20 8.1
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 20 8.1
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 1.2
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = +3
Query: 126 INVANQKSNCFATWVQQFISQLKR 197
+++ +K NC +W+ +F ++ KR
Sbjct: 391 LHMQPRKKNCCRSWLSKFPTRSKR 414
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 1.2
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = +3
Query: 126 INVANQKSNCFATWVQQFISQLKR 197
+++ +K NC +W+ +F ++ KR
Sbjct: 391 LHMQPRKKNCCRSWLSKFPTRSKR 414
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.8 bits (44), Expect = 2.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 191 EKEGILKINCWV 226
EK IL NCWV
Sbjct: 47 EKNQILTTNCWV 58
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 2.7
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = +1
Query: 232 MKTINNKSIYNDMEYFRMNKQ 294
+ +++NK+I+N+ Y NK+
Sbjct: 315 ISSLSNKTIHNNNNYKNYNKK 335
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 20.6 bits (41), Expect = 4.7
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +2
Query: 98 IRNILNNIYY*CSKSKIKLFRHVGSTIYQSVEKEGILKINCW 223
+ N + NI+ + K+ R++ S +K LKI W
Sbjct: 55 VHNHIQNIFKIIKSTNEKITRYIIRMFLISQQKTSKLKIYKW 96
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 20.6 bits (41), Expect = 4.7
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +2
Query: 98 IRNILNNIYY*CSKSKIKLFRHVGSTIYQSVEKEGILKINCW 223
+ N + NI+ + K+ R++ S +K LKI W
Sbjct: 38 VHNHIQNIFKIIKSTNEKITRYIIRMFLISQQKTSKLKIYKW 79
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 20.2 bits (40), Expect = 6.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 235 KTINNKSIYNDMEYFRMN 288
KTI+N + YN+ Y N
Sbjct: 88 KTIHNNNNYNNNNYNNYN 105
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 20.2 bits (40), Expect = 6.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -3
Query: 309 FLNILLFIHSEVLHIIIYTFII 244
F + LLFI + + +Y FI+
Sbjct: 84 FASFLLFILLVQIAVAVYAFIV 105
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 8.1
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 235 KTINNKSIYNDMEYFRMNK 291
KTI+N + YN+ Y K
Sbjct: 88 KTIHNNNNYNNNNYNNYKK 106
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 19.8 bits (39), Expect = 8.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 112 KQHLLLM*QIKNQIVSPR 165
K L QIKN IVSP+
Sbjct: 205 KDKATLADQIKNGIVSPQ 222
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 19.8 bits (39), Expect = 8.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 112 KQHLLLM*QIKNQIVSPR 165
K L QIKN IVSP+
Sbjct: 200 KDKATLADQIKNGIVSPQ 217
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,297
Number of Sequences: 438
Number of extensions: 1733
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6719922
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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