Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9h05
(685 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887 52 3e-07
02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309 51 7e-07
01_06_0447 + 29452194-29452361,29453232-29453317,29453403-294536... 45 5e-05
05_07_0283 - 28937027-28937110,28937211-28937549,28937641-289377... 44 1e-04
01_05_0410 + 21914995-21915168,21915268-21915353,21915446-219156... 43 3e-04
02_01_0763 - 5665010-5665202,5665285-5665375,5665460-5666245,566... 41 8e-04
07_03_0117 + 13589997-13590998 41 0.001
11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733 40 0.001
06_03_0691 + 23552437-23552914,23555168-23555953,23556045-235561... 40 0.001
02_02_0134 + 7082462-7082627,7084199-7084325,7084404-7084611,708... 40 0.001
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 38 0.010
05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717 36 0.030
01_01_1139 - 9024609-9024708,9024832-9024910,9025083-9025252,902... 35 0.052
05_06_0233 + 26599068-26599466,26601214-26601829,26601871-266019... 34 0.091
01_07_0083 + 40970890-40971015,40971886-40971994,40972679-409727... 33 0.16
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 32 0.37
03_01_0644 - 4719954-4720022,4720445-4720912,4721009-4721312,472... 31 0.85
12_01_0019 - 135627-135983,136564-136797,137118-137196,137268-13... 30 2.0
11_01_0021 - 143576-143932,144434-144667,144988-145066,145138-14... 30 2.0
04_04_0048 + 22351788-22352177,22353175-22353711 28 6.0
08_02_0021 + 11307795-11308093,11308454-11308556,11309623-113099... 28 7.9
>05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887
Length = 380
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/33 (66%), Positives = 29/33 (87%)
Frame = +1
Query: 568 GFLKDFLAGGISAAISKTAVAPIERVKLILQVQ 666
GF+ DF+ GG+SAA+SKTA APIER+KL++Q Q
Sbjct: 79 GFMIDFMMGGVSAAVSKTAAAPIERIKLLIQNQ 111
>02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309
Length = 382
Score = 51.2 bits (117), Expect = 7e-07
Identities = 23/32 (71%), Positives = 28/32 (87%)
Frame = +1
Query: 571 FLKDFLAGGISAAISKTAVAPIERVKLILQVQ 666
F+ DFL GG+SAA+SKTA APIERVKL++Q Q
Sbjct: 82 FMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQ 113
>01_06_0447 +
29452194-29452361,29453232-29453317,29453403-29453610,
29454252-29454381,29454561-29454745,29454858-29454989,
29455747-29455851
Length = 337
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/32 (53%), Positives = 27/32 (84%)
Frame = +1
Query: 571 FLKDFLAGGISAAISKTAVAPIERVKLILQVQ 666
F K+ +AGG++ A SKTA+AP+ER+K++LQ +
Sbjct: 27 FAKEMIAGGVAGAFSKTAIAPLERLKILLQTR 58
>05_07_0283 -
28937027-28937110,28937211-28937549,28937641-28937754,
28937843-28937955,28939050-28939087,28939315-28939478,
28939746-28939794,28940986-28941152
Length = 355
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/31 (54%), Positives = 26/31 (83%)
Frame = +1
Query: 577 KDFLAGGISAAISKTAVAPIERVKLILQVQH 669
K AGG++ +S+TAVAP+ER+K++LQVQ+
Sbjct: 45 KSLFAGGVAGGVSRTAVAPLERMKILLQVQN 75
>01_05_0410 +
21914995-21915168,21915268-21915353,21915446-21915656,
21915869-21915998,21916740-21916924,21917014-21917145,
21917329-21917433
Length = 340
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/32 (53%), Positives = 26/32 (81%)
Frame = +1
Query: 571 FLKDFLAGGISAAISKTAVAPIERVKLILQVQ 666
+ K+ +AGG + A +KTAVAP+ERVK++LQ +
Sbjct: 29 YAKELIAGGAAGAFAKTAVAPLERVKILLQTR 60
>02_01_0763 -
5665010-5665202,5665285-5665375,5665460-5666245,
5667745-5668225
Length = 516
Score = 41.1 bits (92), Expect = 8e-04
Identities = 17/30 (56%), Positives = 25/30 (83%)
Frame = +1
Query: 577 KDFLAGGISAAISKTAVAPIERVKLILQVQ 666
K +AGG+S A S+TA AP++R+K+I+QVQ
Sbjct: 235 KYLIAGGVSGATSRTATAPLDRLKVIMQVQ 264
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +1
Query: 586 LAGGISAAISKTAVAPIERVKLILQ 660
+AGG++ A+++TA+ PI+ VK LQ
Sbjct: 333 MAGGLAGAVAQTAIYPIDLVKTRLQ 357
>07_03_0117 + 13589997-13590998
Length = 333
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/31 (51%), Positives = 25/31 (80%)
Frame = +1
Query: 571 FLKDFLAGGISAAISKTAVAPIERVKLILQV 663
F ++ +AGG++ ++KTAVAP+ERV L+ QV
Sbjct: 41 FAREMVAGGVAGVVAKTAVAPLERVNLMRQV 71
>11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733
Length = 329
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 580 DFLAGGISAAISKTAVAPIERVKLILQVQ 666
DF GG +A ++KT AP+ERVKL+LQ Q
Sbjct: 27 DFAMGGAAAVVAKTGAAPVERVKLLLQNQ 55
>06_03_0691 +
23552437-23552914,23555168-23555953,23556045-23556135,
23556214-23556406
Length = 515
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/30 (56%), Positives = 25/30 (83%)
Frame = +1
Query: 577 KDFLAGGISAAISKTAVAPIERVKLILQVQ 666
K +AGGI+ A S+TA AP++R+K+I+QVQ
Sbjct: 234 KYLIAGGIAGAASRTATAPLDRLKVIMQVQ 263
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +1
Query: 586 LAGGISAAISKTAVAPIERVKLILQ 660
+AGG++ A+++TA+ P++ VK LQ
Sbjct: 332 VAGGLAGAVAQTAIYPVDLVKTRLQ 356
>02_02_0134 +
7082462-7082627,7084199-7084325,7084404-7084611,
7084864-7084990,7085071-7085255,7085332-7085454,
7085777-7085836,7085980-7086117
Length = 377
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/31 (45%), Positives = 26/31 (83%)
Frame = +1
Query: 574 LKDFLAGGISAAISKTAVAPIERVKLILQVQ 666
+++ +AGG++ ++KTAVAP+ERVK++ Q +
Sbjct: 26 VRELVAGGVAGGVAKTAVAPLERVKILFQAR 56
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 568 GFLKDFLAGGISAAISKTAVAPIERVKLILQVQ 666
G + LAGG++ A+SKT AP+ R+ ++ QVQ
Sbjct: 35 GTVPHLLAGGVAGAVSKTCTAPLARLTILFQVQ 67
>05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717
Length = 415
Score = 35.9 bits (79), Expect = 0.030
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +1
Query: 574 LKDFLAGGISAAISKTAVAPIERVKLILQV 663
LK ++GGI+ A+S+TAVAP+E ++ L V
Sbjct: 135 LKRLISGGIAGAVSRTAVAPLETIRTHLMV 164
>01_01_1139 -
9024609-9024708,9024832-9024910,9025083-9025252,
9025339-9025451,9025518-9025586,9025867-9025944,
9026022-9026084,9026590-9026670,9027166-9027222,
9027352-9027705
Length = 387
Score = 35.1 bits (77), Expect = 0.052
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 583 FLAGGISAAISKTAVAPIERVKLILQVQHV 672
F AG + A++KT AP++RVKL++Q V
Sbjct: 93 FAAGAAAGAVAKTITAPLDRVKLLMQTHSV 122
>05_06_0233 +
26599068-26599466,26601214-26601829,26601871-26601917,
26602101-26602268
Length = 409
Score = 34.3 bits (75), Expect = 0.091
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 571 FLKDFLAGGISAAISKTAVAPIERVKLILQVQ 666
F +D +AG T VAPIER KL+LQ Q
Sbjct: 48 FERDLVAGAAMGGAVHTVVAPIERAKLLLQTQ 79
>01_07_0083 +
40970890-40971015,40971886-40971994,40972679-40972790,
40972944-40973100,40973609-40973761,40974143-40974292,
40974803-40974999,40975446-40975473
Length = 343
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 574 LKDFLAGGISAAISKTAVAPIERVKLILQVQ 666
L D LAG IS IS+T +P++ +K+ QVQ
Sbjct: 14 LVDALAGAISGGISRTVTSPLDVIKIRFQVQ 44
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 568 GFLKDFLAGGISAAISKTAVAPIERVKLILQV 663
G + AGG + A+SKT AP+ R+ ++ QV
Sbjct: 7 GTVAHLAAGGFAGAVSKTCTAPLARLTILFQV 38
>03_01_0644 -
4719954-4720022,4720445-4720912,4721009-4721312,
4722321-4722745
Length = 421
Score = 31.1 bits (67), Expect = 0.85
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 577 KDFLAGGISAAISKTAVAPIERVKL 651
K +G ++A +S+T VAP+ER+KL
Sbjct: 129 KHLWSGAVAAMVSRTVVAPLERLKL 153
>12_01_0019 -
135627-135983,136564-136797,137118-137196,137268-137383,
137847-137991,138177-138594,138644-138649,139315-139945
Length = 661
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 574 LKDFLAGGISAAISKTAVAPIERVKLILQVQHVS 675
LK LAGG+++A+S + + PI+ +K +Q +S
Sbjct: 376 LKSALAGGLASALSTSVMHPIDSMKTRVQASSLS 409
>11_01_0021 -
143576-143932,144434-144667,144988-145066,145138-145253,
145717-145861,146048-146465,147206-147869
Length = 670
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 574 LKDFLAGGISAAISKTAVAPIERVKLILQVQHVS 675
LK LAGG+++A+S + + PI+ +K +Q +S
Sbjct: 385 LKSALAGGLASALSTSVMHPIDSMKTRVQASSLS 418
>04_04_0048 + 22351788-22352177,22353175-22353711
Length = 308
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +1
Query: 568 GFLKDFLAGGISAAISKTAVAPIERVKLILQ 660
G L+ LAGG+S +++ +P + +K+ +Q
Sbjct: 114 GLLEKALAGGVSGVVAQVVASPADLIKVRMQ 144
>08_02_0021 +
11307795-11308093,11308454-11308556,11309623-11309931,
11310190-11310618
Length = 379
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 383 KLNLLTLSFKLSSCIRWEKILNSEFTTGSLHARRG 279
K +L +S LSSC RW++ L + + + RG
Sbjct: 6 KFSLSLISIALSSCSRWQQELGPAYLSTKVRVVRG 40
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,767,382
Number of Sequences: 37544
Number of extensions: 260969
Number of successful extensions: 503
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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