Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9h05
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical pr... 53 2e-07
X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP translo... 53 2e-07
U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical ... 53 2e-07
U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical pr... 35 0.047
Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical pr... 29 2.3
U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z92786-8|CAB07210.1| 325|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z47809-3|CAA87781.2| 322|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein. 27 9.4
X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein... 27 9.4
U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation... 27 9.4
>Z82059-8|CAD89757.1| 207|Caenorhabditis elegans Hypothetical
protein T27E9.1c protein.
Length = 207
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1
Query: 571 FLKDFLAGGISAAISKTAVAPIERVKLILQVQHVSXQI 684
FL D +GG +AA+SKTAVAPIERVKL+LQVQ S I
Sbjct: 12 FLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASKAI 49
>Z82059-7|CAD89756.1| 128|Caenorhabditis elegans Hypothetical
protein T27E9.1b protein.
Length = 128
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1
Query: 571 FLKDFLAGGISAAISKTAVAPIERVKLILQVQHVSXQI 684
FL D +GG +AA+SKTAVAPIERVKL+LQVQ S I
Sbjct: 12 FLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASKAI 49
>Z82059-6|CAB04874.1| 300|Caenorhabditis elegans Hypothetical
protein T27E9.1a protein.
Length = 300
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1
Query: 571 FLKDFLAGGISAAISKTAVAPIERVKLILQVQHVSXQI 684
FL D +GG +AA+SKTAVAPIERVKL+LQVQ S I
Sbjct: 12 FLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASKAI 49
>Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical
protein K01H12.2 protein.
Length = 313
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1
Query: 571 FLKDFLAGGISAAISKTAVAPIERVKLILQVQHVSXQI 684
FL D +GG +AA+SKTAVAPIERVKL+LQVQ S I
Sbjct: 25 FLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASLTI 62
>X76112-1|CAA53718.1| 300|Caenorhabditis elegans ADP/ATP
translocase protein.
Length = 300
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1
Query: 571 FLKDFLAGGISAAISKTAVAPIERVKLILQVQHVSXQI 684
FL D +GG +AA+SKTAVAPIERVKL+LQVQ S I
Sbjct: 12 FLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASKAI 49
>U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical
protein T01B11.4 protein.
Length = 313
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1
Query: 571 FLKDFLAGGISAAISKTAVAPIERVKLILQVQHVSXQI 684
FL D +GG +AA+SKTAVAPIERVKL+LQVQ S I
Sbjct: 25 FLIDLASGGTAAAVSKTAVAPIERVKLLLQVQDASLTI 62
>AF003141-4|AAK21485.1| 300|Caenorhabditis elegans Hypothetical
protein W02D3.6 protein.
Length = 300
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/38 (68%), Positives = 30/38 (78%)
Frame = +1
Query: 571 FLKDFLAGGISAAISKTAVAPIERVKLILQVQHVSXQI 684
FL D +GG +AAISKTAVAPIERVKL+LQV VS +
Sbjct: 12 FLVDLASGGTAAAISKTAVAPIERVKLLLQVSDVSETV 49
>U64842-4|AAB37086.2| 306|Caenorhabditis elegans Hypothetical
protein F25B4.7 protein.
Length = 306
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/33 (69%), Positives = 29/33 (87%)
Frame = +1
Query: 571 FLKDFLAGGISAAISKTAVAPIERVKLILQVQH 669
F KDF+AG +AAISKT +AP+ERVKLILQ+Q+
Sbjct: 18 FSKDFMAGATAAAISKTVIAPVERVKLILQLQN 50
>Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical
protein C47E12.2 protein.
Length = 306
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/33 (66%), Positives = 28/33 (84%)
Frame = +1
Query: 571 FLKDFLAGGISAAISKTAVAPIERVKLILQVQH 669
F D L GG+SA++SKT VAPIERVK++LQVQ+
Sbjct: 21 FAIDLLIGGVSASVSKTVVAPIERVKILLQVQY 53
>Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical
protein R07E3.4 protein.
Length = 298
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +1
Query: 577 KDFLAGGISAAISKTAVAPIERVKLILQVQHVS 675
K LAG +AAISKT AP +RVKL+LQ+Q S
Sbjct: 15 KKCLAGSAAAAISKTTTAPFDRVKLVLQLQRQS 47
>Z50873-3|CAA90761.4| 531|Caenorhabditis elegans Hypothetical
protein F17E5.2 protein.
Length = 531
Score = 35.1 bits (77), Expect = 0.047
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +1
Query: 577 KDFLAGGISAAISKTAVAPIERVKLILQV 663
+ +AGG++ A+S+T AP +R+K+ LQV
Sbjct: 246 RHLVAGGVAGAMSRTCTAPFDRIKVYLQV 274
>Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical
protein C54G10.4b protein.
Length = 360
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/26 (46%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = +1
Query: 592 GGISAAISKTAVA-PIERVKLILQVQ 666
GG +A ++++ +A P ER+KL+LQ+Q
Sbjct: 101 GGCAAGMAQSVIAAPTERIKLLLQIQ 126
>Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical
protein C54G10.4a protein.
Length = 310
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/26 (46%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = +1
Query: 592 GGISAAISKTAVA-PIERVKLILQVQ 666
GG +A ++++ +A P ER+KL+LQ+Q
Sbjct: 101 GGCAAGMAQSVIAAPTERIKLLLQIQ 126
>U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical
protein K02F3.2 protein.
Length = 707
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 583 FLAGGISAAISKTAVAPIERVKLILQVQHVS 675
FL G ++ A TAV PI+ VK +Q Q S
Sbjct: 373 FLLGSVAGACGATAVYPIDLVKTRMQNQRTS 403
>Z92786-8|CAB07210.1| 325|Caenorhabditis elegans Hypothetical
protein F47H4.11 protein.
Length = 325
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -3
Query: 473 YQGLGVSDERLSILRIKPLFKNNFKSIFHQKLNLLTLSFKLSSCIRWEKILNSEFTT 303
Y G G + + +ILR LF NF + + LL ++ I W++ LN+ +T
Sbjct: 122 YSGQGAEEIKENILRTHELFLYNFGEMLKSRKFLLKVA--AFDVILWKEPLNNHLST 176
>Z47809-3|CAA87781.2| 322|Caenorhabditis elegans Hypothetical
protein F42A8.3 protein.
Length = 322
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +2
Query: 74 FKQF----KAIHLTFRLYKRTCVHILLTNNLLSHEFDVTR 181
FKQF K ++ + L RTC ++ N LLS+ D+++
Sbjct: 80 FKQFEYETKNLNNVYSLDNRTCSQVIYDNYLLSYSTDISK 119
>Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein.
Length = 312
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 571 FLKDFLAGGISAAISKTAVAPIERVKLILQVQ 666
F+++ AG ++ + + P ER+K +LQVQ
Sbjct: 104 FIQNANAGALAGVFTTIVMVPGERIKCLLQVQ 135
>X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein
(c1) protein.
Length = 312
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 571 FLKDFLAGGISAAISKTAVAPIERVKLILQVQ 666
F+++ AG ++ + + P ER+K +LQVQ
Sbjct: 104 FIQNANAGALAGVFTTIVMVPGERIKCLLQVQ 135
>U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation
abnormal protein 1 protein.
Length = 312
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 571 FLKDFLAGGISAAISKTAVAPIERVKLILQVQ 666
F+++ AG ++ + + P ER+K +LQVQ
Sbjct: 104 FIQNANAGALAGVFTTIVMVPGERIKCLLQVQ 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,883,560
Number of Sequences: 27780
Number of extensions: 273626
Number of successful extensions: 542
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -