Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9h02
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    26   0.31 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    24   1.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   1.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.9  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   5.0  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   8.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.7  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 12/53 (22%), Positives = 23/53 (43%)
 Frame = +3

Query: 477 NPAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAANVNPDSGWQRY*QPSVYRL 635
           +PA V  +      +  +       G+    G  N +PD+ +++Y  P+ Y L
Sbjct: 43  SPASVASNASAPLHIPAKRAAYDCEGVIRHHGQWNYSPDNHFEQYPNPTYYNL 95


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 366 HSTWGIRHSHLRCIRGIPV 310
           H++  +  S LRC+ GIPV
Sbjct: 127 HTSSNLTVSGLRCVNGIPV 145


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 366 HSTWGIRHSHLRCIRGIPV 310
           H++  +  S LRC+ GIPV
Sbjct: 127 HTSSNLTVSGLRCVNGIPV 145


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 15/64 (23%), Positives = 23/64 (35%)
 Frame = +3

Query: 366 ARLRCVVEVNGERIVQTRGQPGELFPDKPWKGQQNEPNPAVVGMSGIQQTPVGGEPQGQA 545
           AR       +G + VQT  +PG+  P+K     Q       V  +     P    PQ + 
Sbjct: 413 ARPPSTPSADGSKPVQTTPKPGQWVPEKSTSTTQ---RTTTVSTTEAPPAPAVSNPQNEV 469

Query: 546 SPGI 557
              +
Sbjct: 470 DGSV 473


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/49 (16%), Positives = 25/49 (51%)
 Frame = -2

Query: 392 YFDDATQSRTARGEFDILIFDVFVAFQCVFRYFWFSTSDSSYEVFPVSD 246
           Y+D  +  R  + +F+I   +  + +     Y + +  + +Y++ P+++
Sbjct: 29  YYDSKSHFRQGQAKFEITDLEPALQYCTHLIYGYAAIDEETYKLTPLNE 77


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 124 KTRQHNINNAPNCFP 80
           K +QHN N  P   P
Sbjct: 232 KNKQHNFNLPPGAIP 246


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 201 QEWSDHYTCH 230
           Q+ + HYTCH
Sbjct: 77  QDHTTHYTCH 86


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,739
Number of Sequences: 336
Number of extensions: 3691
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)