Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9g18
(615 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 61 5e-10
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 61 5e-10
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 61 5e-10
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 51 8e-07
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 47 9e-06
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 47 9e-06
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 47 9e-06
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 47 9e-06
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 47 9e-06
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 47 9e-06
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 45 4e-05
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 45 4e-05
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 45 4e-05
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 45 4e-05
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 45 4e-05
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 45 4e-05
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 45 5e-05
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 42 3e-04
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 41 8e-04
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 41 8e-04
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 41 8e-04
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 40 0.001
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 40 0.002
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 40 0.002
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 40 0.002
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 40 0.002
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 39 0.002
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 36 0.017
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 36 0.030
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 35 0.040
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 35 0.040
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 35 0.040
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 34 0.070
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 34 0.070
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 34 0.070
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 33 0.12
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 33 0.12
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 33 0.12
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 33 0.21
U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna bi... 32 0.28
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 32 0.28
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 32 0.28
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 32 0.28
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 31 0.65
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 31 0.65
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 31 0.65
AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical ... 27 8.1
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 27 8.1
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 61.3 bits (142), Expect = 5e-10
Identities = 29/70 (41%), Positives = 43/70 (61%)
Frame = +3
Query: 396 PNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKA 575
P + +F+ +LNP T E +E FS+F KI +C +VRD +G S QYAF+E++ E+A
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 576 LREMHLEYID 605
+M ID
Sbjct: 299 FFKMDNVLID 308
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 61.3 bits (142), Expect = 5e-10
Identities = 29/70 (41%), Positives = 43/70 (61%)
Frame = +3
Query: 396 PNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKA 575
P + +F+ +LNP T E +E FS+F KI +C +VRD +G S QYAF+E++ E+A
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 576 LREMHLEYID 605
+M ID
Sbjct: 299 FFKMDNVLID 308
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 61.3 bits (142), Expect = 5e-10
Identities = 29/70 (41%), Positives = 43/70 (61%)
Frame = +3
Query: 396 PNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKA 575
P + +F+ +LNP T E +E FS+F KI +C +VRD +G S QYAF+E++ E+A
Sbjct: 170 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 229
Query: 576 LREMHLEYID 605
+M ID
Sbjct: 230 FFKMDNVLID 239
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 50.8 bits (116), Expect = 8e-07
Identities = 26/78 (33%), Positives = 40/78 (51%)
Frame = +3
Query: 375 NKRVKGNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEK 554
N R +P T+F+GR+N T + + EF + KI +V D GK + YAF+EY
Sbjct: 95 NPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFIEYSD 153
Query: 555 YSCMEKALREMHLEYIDG 608
+ M A ++ +DG
Sbjct: 154 KAEMHTAYKKADGIKVDG 171
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/90 (28%), Positives = 49/90 (54%)
Frame = +3
Query: 333 DRAILRAIYSEYIPNKRVKGNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLV 512
+ A+L + SE R+ + + +F+G L+ E ++S F+KF ++ +++RD+
Sbjct: 113 ESAVLHSA-SEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQ 171
Query: 513 TGKSKQYAFVEYEKYSCMEKALREMHLEYI 602
T KSK Y FV + E A+ M+ ++I
Sbjct: 172 TQKSKGYGFVSFPNKQNAENAIAGMNGKWI 201
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/72 (29%), Positives = 40/72 (55%)
Frame = +3
Query: 399 NHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKAL 578
N ++++G ++ +T + FS + I R+ K+++YAFV YEK C KA+
Sbjct: 236 NTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIF------KTQRYAFVRYEKKECATKAI 289
Query: 579 REMHLEYIDGSE 614
EM+ + + G++
Sbjct: 290 MEMNGKEMAGNQ 301
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +3
Query: 405 TIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALRE 584
++F+G ++ ++TI S FSK ++ ++V D TGK K Y F+E+ E A+R
Sbjct: 19 SVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRN 78
Query: 585 MH 590
++
Sbjct: 79 LN 80
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 47.2 bits (107), Expect = 9e-06
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+FIG+L+ + +E + F+KF I C ++RD GKS+ AFV + SC A +EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 588 H 590
H
Sbjct: 203 H 203
Score = 35.1 bits (77), Expect = 0.040
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +3
Query: 360 SEYIPNKRVKGNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAF 539
++ + N VKG +FI L + + F+ F I+ ++ D VT SK + F
Sbjct: 485 AQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGF 544
Query: 540 VEYEKYSCMEKALREMH 590
V YE A+ M+
Sbjct: 545 VSYENAQSATNAISAMN 561
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 408 IFIGRLNPRTPQET-IESEFSKFDKIIHCRLVRDLVTGKSKQYAFVE-YEKYSCMEKALR 581
+F+G++ PR ET F K+ + C ++RD T SK FV Y + +E
Sbjct: 57 MFVGQI-PRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 582 EMHLEYIDG 608
+++ I+G
Sbjct: 116 LHNIKVIEG 124
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 47.2 bits (107), Expect = 9e-06
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+FIG+L+ + +E + F+KF I C ++RD GKS+ AFV + SC A +EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 588 H 590
H
Sbjct: 203 H 203
Score = 35.1 bits (77), Expect = 0.040
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +3
Query: 360 SEYIPNKRVKGNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAF 539
++ + N VKG +FI L + + F+ F I+ ++ D VT SK + F
Sbjct: 485 AQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGF 544
Query: 540 VEYEKYSCMEKALREMH 590
V YE A+ M+
Sbjct: 545 VSYENAQSATNAISAMN 561
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 408 IFIGRLNPRTPQET-IESEFSKFDKIIHCRLVRDLVTGKSKQYAFVE-YEKYSCMEKALR 581
+F+G++ PR ET F K+ + C ++RD T SK FV Y + +E
Sbjct: 57 MFVGQI-PRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 582 EMHLEYIDG 608
+++ I+G
Sbjct: 116 LHNIKVIEG 124
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 47.2 bits (107), Expect = 9e-06
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+FIG+L+ + +E + F+KF I C ++RD GKS+ AFV + SC A +EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 588 H 590
H
Sbjct: 203 H 203
Score = 35.1 bits (77), Expect = 0.040
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +3
Query: 360 SEYIPNKRVKGNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAF 539
++ + N VKG +FI L + + F+ F I+ ++ D VT SK + F
Sbjct: 414 AQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGF 473
Query: 540 VEYEKYSCMEKALREMH 590
V YE A+ M+
Sbjct: 474 VSYENAQSATNAISAMN 490
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 408 IFIGRLNPRTPQET-IESEFSKFDKIIHCRLVRDLVTGKSKQYAFVE-YEKYSCMEKALR 581
+F+G++ PR ET F K+ + C ++RD T SK FV Y + +E
Sbjct: 57 MFVGQI-PRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 582 EMHLEYIDG 608
+++ I+G
Sbjct: 116 LHNIKVIEG 124
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 47.2 bits (107), Expect = 9e-06
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+FIG+L+ + +E + F+KF I C ++RD GKS+ AFV + SC A +EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 588 H 590
H
Sbjct: 203 H 203
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 408 IFIGRLNPRTPQET-IESEFSKFDKIIHCRLVRDLVTGKSKQYAFVE-YEKYSCMEKALR 581
+F+G++ PR ET F K+ + C ++RD T SK FV Y + +E
Sbjct: 57 MFVGQI-PRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 582 EMHLEYIDG 608
+++ I+G
Sbjct: 116 LHNIKVIEG 124
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 47.2 bits (107), Expect = 9e-06
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+FIG+L+ + +E + F+KF I C ++RD GKS+ AFV + SC A +EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 588 H 590
H
Sbjct: 203 H 203
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 408 IFIGRLNPRTPQET-IESEFSKFDKIIHCRLVRDLVTGKSKQYAFVE-YEKYSCMEKALR 581
+F+G++ PR ET F K+ + C ++RD T SK FV Y + +E
Sbjct: 57 MFVGQI-PRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 582 EMHLEYIDG 608
+++ I+G
Sbjct: 116 LHNIKVIEG 124
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 47.2 bits (107), Expect = 9e-06
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+FIG+L+ + +E + F+KF I C ++RD GKS+ AFV + SC A +EM
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSCAVVATKEM 202
Query: 588 H 590
H
Sbjct: 203 H 203
Score = 35.1 bits (77), Expect = 0.040
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +3
Query: 360 SEYIPNKRVKGNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAF 539
++ + N VKG +FI L + + F+ F I+ ++ D VT SK + F
Sbjct: 485 AQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGF 544
Query: 540 VEYEKYSCMEKALREMH 590
V YE A+ M+
Sbjct: 545 VSYENAQSATNAISAMN 561
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 408 IFIGRLNPRTPQET-IESEFSKFDKIIHCRLVRDLVTGKSKQYAFVE-YEKYSCMEKALR 581
+F+G++ PR ET F K+ + C ++RD T SK FV Y + +E
Sbjct: 57 MFVGQI-PRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 582 EMHLEYIDG 608
+++ I+G
Sbjct: 116 LHNIKVIEG 124
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 45.2 bits (102), Expect = 4e-05
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+F+G L+ + + F F + +++RD T KSK Y FV Y K E+A+ +M
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 588 HLEYI 602
+ +++
Sbjct: 84 NGQWL 88
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 45.2 bits (102), Expect = 4e-05
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+F+G L+ + + F F + +++RD T KSK Y FV Y K E+A+ +M
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 588 HLEYI 602
+ +++
Sbjct: 94 NGQWL 98
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 45.2 bits (102), Expect = 4e-05
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+F+G L+ + + F F + +++RD T KSK Y FV Y K E+A+ +M
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 588 HLEYI 602
+ +++
Sbjct: 197 NGQWL 201
Score = 32.7 bits (71), Expect = 0.21
Identities = 15/62 (24%), Positives = 34/62 (54%)
Frame = +3
Query: 405 TIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALRE 584
T+++G L+ ++ I + F++ + +++ D G + YAFVE+ + +AL+
Sbjct: 47 TLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQASQALQT 103
Query: 585 MH 590
M+
Sbjct: 104 MN 105
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 45.2 bits (102), Expect = 4e-05
Identities = 19/65 (29%), Positives = 35/65 (53%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+F+G L+ + + F F + +++RD T KSK Y FV Y K E+A+ +M
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 588 HLEYI 602
+ +++
Sbjct: 165 NGQWL 169
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/54 (31%), Positives = 33/54 (61%)
Frame = +3
Query: 387 KGNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEY 548
KGN + IF+G ++P E + S F+++ ++ ++ D G+S+ +AFVE+
Sbjct: 24 KGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/54 (31%), Positives = 33/54 (61%)
Frame = +3
Query: 387 KGNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEY 548
KGN + IF+G ++P E + S F+++ ++ ++ D G+S+ +AFVE+
Sbjct: 24 KGNEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 44.8 bits (101), Expect = 5e-05
Identities = 19/66 (28%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHC-RLVRDLVTGKSKQYAFVEYEKYSCMEKALRE 584
IF+G L+P ++ + FS F I+ +++RD+ +G SK +AF+ + + + AL
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
Query: 585 MHLEYI 602
M+ +++
Sbjct: 162 MNGQFL 167
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 44.8 bits (101), Expect = 5e-05
Identities = 19/66 (28%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHC-RLVRDLVTGKSKQYAFVEYEKYSCMEKALRE 584
IF+G L+P ++ + FS F I+ +++RD+ +G SK +AF+ + + + AL
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
Query: 585 MHLEYI 602
M+ +++
Sbjct: 172 MNGQFL 177
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+F+G L + F KF ++ +++RD T K K Y FV Y + E+A+ EM
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193
Query: 588 H 590
+
Sbjct: 194 N 194
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/59 (23%), Positives = 32/59 (54%)
Frame = +3
Query: 405 TIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALR 581
T+F+ L+P E + + F++ ++ +++ + G + YAFVE+ ++ AL+
Sbjct: 41 TLFVANLDPAITDEFLATLFNQIGAVMKAKIIFE---GLNDPYAFVEFSDHNQATLALQ 96
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/59 (38%), Positives = 30/59 (50%)
Frame = +3
Query: 372 PNKRVKGNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEY 548
PN + G + I L QE + S F+ +I C+LVRD VTG+S Y FV Y
Sbjct: 33 PNVDI-GESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNY 90
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 41.1 bits (92), Expect = 6e-04
Identities = 25/82 (30%), Positives = 42/82 (51%)
Frame = +3
Query: 345 LRAIYSEYIPNKRVKGNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKS 524
+R ++S+ P R GN N IFI L+ +++ FS F I+ C++ D G S
Sbjct: 128 MRIMWSQRDPAARRAGNGN--IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNS 184
Query: 525 KQYAFVEYEKYSCMEKALREMH 590
K Y FV +E + A+ +++
Sbjct: 185 KGYGFVHFETEHSAQTAIEKVN 206
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 405 TIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALRE 584
+++IG L+P + + +FS ++ R+ RD + S YA+V +++ + E+AL
Sbjct: 58 SLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT 117
Query: 585 MHLEYIDG 608
M+ E I G
Sbjct: 118 MNFEVIHG 125
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+F+ QE + + FSKF +I ++ D GK K + FV + +A+ ++
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQAVEKL 298
Query: 588 HLEYIDGSE 614
+ ++G++
Sbjct: 299 NDSILEGTD 307
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/80 (22%), Positives = 37/80 (46%)
Frame = +3
Query: 363 EYIPNKRVKGNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFV 542
E + +RV+ +++ + + + FS F I +++ D G+SK + FV
Sbjct: 330 EALKQERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFV 388
Query: 543 EYEKYSCMEKALREMHLEYI 602
+EK A+ +M+ + I
Sbjct: 389 CFEKPEEATAAVTDMNSKMI 408
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 41.1 bits (92), Expect = 6e-04
Identities = 25/82 (30%), Positives = 42/82 (51%)
Frame = +3
Query: 345 LRAIYSEYIPNKRVKGNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKS 524
+R ++S+ P R GN N IFI L+ +++ FS F I+ C++ D G S
Sbjct: 128 MRIMWSQRDPAARRAGNGN--IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNS 184
Query: 525 KQYAFVEYEKYSCMEKALREMH 590
K Y FV +E + A+ +++
Sbjct: 185 KGYGFVHFETEHSAQTAIEKVN 206
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 405 TIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALRE 584
+++IG L+P + + +FS ++ R+ RD + S YA+V +++ + E+AL
Sbjct: 58 SLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT 117
Query: 585 MHLEYIDG 608
M+ E I G
Sbjct: 118 MNFEVIHG 125
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+F+ QE + + FSKF +I ++ D GK K + FV + +A+ ++
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQAVEKL 298
Query: 588 HLEYIDGSE 614
+ ++G++
Sbjct: 299 NDSILEGTD 307
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/80 (22%), Positives = 37/80 (46%)
Frame = +3
Query: 363 EYIPNKRVKGNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFV 542
E + +RV+ +++ + + + FS F I +++ D G+SK + FV
Sbjct: 330 EALKQERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFV 388
Query: 543 EYEKYSCMEKALREMHLEYI 602
+EK A+ +M+ + I
Sbjct: 389 CFEKPEEATAAVTDMNSKMI 408
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/69 (27%), Positives = 38/69 (55%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+FIG L+ +T E + F +F ++ C ++RD T +++ + F+ + S ++K L
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 588 HLEYIDGSE 614
E +DG +
Sbjct: 107 EHE-LDGKK 114
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+F G L E + F K+ ++VR+ T KSK Y FV + +A+REM
Sbjct: 205 VFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREM 264
Query: 588 HLEYI 602
+Y+
Sbjct: 265 DGKYV 269
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/69 (27%), Positives = 38/69 (55%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+FIG L+ +T E + F +F ++ C ++RD T +++ + F+ + S ++K L
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 588 HLEYIDGSE 614
E +DG +
Sbjct: 107 EHE-LDGKK 114
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+++ +ET+E F+KF I C ++ V GKSK + FV + E A++ +
Sbjct: 215 VYVKNFGDHYNKETLEKVFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQAL 272
Query: 588 HLEYIDGSE 614
H I+G++
Sbjct: 273 HDSTIEGTD 281
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/68 (26%), Positives = 38/68 (55%)
Frame = +3
Query: 405 TIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALRE 584
++++G L+P + + +FS ++ R+ RD T S YA+V +++ + E+A+
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 585 MHLEYIDG 608
M+ E + G
Sbjct: 93 MNFEALHG 100
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/82 (30%), Positives = 42/82 (51%)
Frame = +3
Query: 345 LRAIYSEYIPNKRVKGNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKS 524
+R ++S+ P R G N IFI L+ ++I FS F I+ C++ D G S
Sbjct: 103 MRIMWSQRDPAMRRSGAGN--IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFS 159
Query: 525 KQYAFVEYEKYSCMEKALREMH 590
K Y FV +E + A+++++
Sbjct: 160 KGYGFVHFETEEAAQNAIQKVN 181
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/65 (21%), Positives = 33/65 (50%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+++ L+ + ++ +F + I +++ D G+SK + FV +EK A+ EM
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEM 377
Query: 588 HLEYI 602
+ + +
Sbjct: 378 NSKMV 382
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/62 (25%), Positives = 38/62 (61%)
Frame = +3
Query: 405 TIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALRE 584
++++G +T +E + + FS +I + R+V D TG+ + +AF+E+ + ++A+ +
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 585 MH 590
M+
Sbjct: 66 MN 67
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 1/109 (0%)
Frame = +3
Query: 255 TDFKKYATEYDPIKIGSIDGTDVEPHDRAILRAIYSEYIPNKRVKGNPNHTIFIGRLNPR 434
T + K+ E K +GT ++ H ++R + + +K+ + + IF+G L
Sbjct: 203 TFYVKFGAEESVEKALKYNGTKLDDH---VIRV---DKVGSKKKEFGKDMAIFVGNLPFE 256
Query: 435 TPQETIESEFS-KFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKAL 578
++ + + FS + + R+VRD TGK K +AFV +++ S + AL
Sbjct: 257 ITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL 305
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/68 (26%), Positives = 38/68 (55%)
Frame = +3
Query: 405 TIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALRE 584
++++G L+P + + +FS ++ R+ RD T S YA+V +++ + E+A+
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 585 MHLEYIDG 608
M+ E + G
Sbjct: 93 MNFEALHG 100
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+++ +ET+E F+KF I C ++ V GKSK + FV + E A++ +
Sbjct: 155 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQAL 212
Query: 588 HLEYIDGSE 614
H I+G++
Sbjct: 213 HDSTIEGTD 221
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/65 (21%), Positives = 33/65 (50%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+++ L+ + ++ +F + I +++ D G+SK + FV +EK A+ EM
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEM 317
Query: 588 HLEYI 602
+ + +
Sbjct: 318 NSKMV 322
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+++ +ET+E F+KF I C ++ V GKSK + FV + E A++ +
Sbjct: 152 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQAL 209
Query: 588 HLEYIDGSE 614
H I+G++
Sbjct: 210 HDSTIEGTD 218
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/82 (30%), Positives = 42/82 (51%)
Frame = +3
Query: 345 LRAIYSEYIPNKRVKGNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKS 524
+R ++S+ P R G N IFI L+ ++I FS F I+ C++ D G S
Sbjct: 40 MRIMWSQRDPAMRRSGAGN--IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFS 96
Query: 525 KQYAFVEYEKYSCMEKALREMH 590
K Y FV +E + A+++++
Sbjct: 97 KGYGFVHFETEEAAQNAIQKVN 118
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/65 (21%), Positives = 33/65 (50%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+++ L+ + ++ +F + I +++ D G+SK + FV +EK A+ EM
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEM 314
Query: 588 HLEYI 602
+ + +
Sbjct: 315 NSKMV 319
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/68 (26%), Positives = 38/68 (55%)
Frame = +3
Query: 405 TIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALRE 584
++++G L+P + + +FS ++ R+ RD T S YA+V +++ + E+A+
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 585 MHLEYIDG 608
M+ E + G
Sbjct: 93 MNFEALHG 100
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+++ +ET+E F+KF I C ++ V GKSK + FV + E A++ +
Sbjct: 215 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQAL 272
Query: 588 HLEYIDGSE 614
H I+G++
Sbjct: 273 HDSTIEGTD 281
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/82 (30%), Positives = 42/82 (51%)
Frame = +3
Query: 345 LRAIYSEYIPNKRVKGNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKS 524
+R ++S+ P R G N IFI L+ ++I FS F I+ C++ D G S
Sbjct: 103 MRIMWSQRDPAMRRSGAGN--IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFS 159
Query: 525 KQYAFVEYEKYSCMEKALREMH 590
K Y FV +E + A+++++
Sbjct: 160 KGYGFVHFETEEAAQNAIQKVN 181
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/65 (21%), Positives = 33/65 (50%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
+++ L+ + ++ +F + I +++ D G+SK + FV +EK A+ EM
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEM 377
Query: 588 HLEYI 602
+ + +
Sbjct: 378 NSKMV 382
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/58 (27%), Positives = 33/58 (56%)
Frame = +3
Query: 405 TIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKAL 578
++++G ++ ++ IE F+ K+ + +D TG K +AFVE++K ++ AL
Sbjct: 47 SVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLAL 104
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/48 (35%), Positives = 32/48 (66%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYE 551
I+IG L+ + + + FS++ ++++ L+RD TGKSK +AF+ Y+
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYK 87
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 36.3 bits (80), Expect = 0.017
Identities = 14/62 (22%), Positives = 38/62 (61%)
Frame = +3
Query: 405 TIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALRE 584
++++G +T ++ + + FS+ + + R+V D TG+ + +AFVE+ + + ++A+ +
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 585 MH 590
+
Sbjct: 65 FN 66
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 35.9 bits (79), Expect = 0.023
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 10/103 (9%)
Frame = +3
Query: 318 DVEPHDRAILRAIYSEYIP-----NKRVKGNPNHT-----IFIGRLNPRTPQETIESEFS 467
D + HD L ++ S +P R N N T ++I L P T + + S
Sbjct: 69 DQQHHDSTPLSSVSSRRVPLPPTSQHRASSNFNTTPSSTNLYIRGLMPNTNDDLLREMCS 128
Query: 468 KFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREMHLE 596
K+ I + + D T K Y FV++E A+ ++ E
Sbjct: 129 KYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGLNTE 171
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 35.9 bits (79), Expect = 0.023
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +3
Query: 438 PQETIESE----FSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREMH 590
PQE E E F K ++I + RD VTG K +AFV +E +A+ E++
Sbjct: 184 PQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 35.5 bits (78), Expect = 0.030
Identities = 14/62 (22%), Positives = 38/62 (61%)
Frame = +3
Query: 405 TIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALRE 584
++++G + + +E I + F+ + + R+V D TG+ + +AFVE+ + + ++A+ +
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 585 MH 590
++
Sbjct: 67 LN 68
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 35.1 bits (77), Expect = 0.040
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +3
Query: 360 SEYIPNKRVKGNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAF 539
++ + N VKG +FI L + + F+ F I+ ++ D VT SK + F
Sbjct: 321 AQMVGNGDVKGPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGF 380
Query: 540 VEYEKYSCMEKALREMH 590
V YE A+ M+
Sbjct: 381 VSYENAQSATNAISAMN 397
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 35.1 bits (77), Expect = 0.040
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +3
Query: 390 GNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCME 569
G+ + +++G L ++ +E F K+ +I + D+ +G+ +AFVE+E + E
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHRDAE 60
Query: 570 KALREMHLEYIDG 608
A+R DG
Sbjct: 61 DAVRARDGYEFDG 73
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 35.1 bits (77), Expect = 0.040
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +3
Query: 390 GNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCME 569
G+ + +++G L ++ +E F K+ +I + D+ +G+ +AFVE+E + E
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHRDAE 60
Query: 570 KALREMHLEYIDG 608
A+R DG
Sbjct: 61 DAVRARDGYEFDG 73
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 34.3 bits (75), Expect = 0.070
Identities = 18/67 (26%), Positives = 36/67 (53%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
IF+G L T + + +S+F +I ++RD T +S+ + FV + + ++ A+++
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ- 83
Query: 588 HLEYIDG 608
IDG
Sbjct: 84 RPHIIDG 90
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 34.3 bits (75), Expect = 0.070
Identities = 18/67 (26%), Positives = 36/67 (53%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
IF+G L T + + +S+F +I ++RD T +S+ + FV + + ++ A+++
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ- 83
Query: 588 HLEYIDG 608
IDG
Sbjct: 84 RPHIIDG 90
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 34.3 bits (75), Expect = 0.070
Identities = 18/67 (26%), Positives = 36/67 (53%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
IF+G L T + + +S+F +I ++RD T +S+ + FV + + ++ A+++
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ- 83
Query: 588 HLEYIDG 608
IDG
Sbjct: 84 RPHIIDG 90
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALRE 584
+FIG L+ T E + + FS++ ++ ++RD T S+ + FV + E A+ +
Sbjct: 51 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALRE 584
+FIG L+ T E + + FS++ ++ ++RD T S+ + FV + E A+ +
Sbjct: 71 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALRE 584
+FIG L+ T E + + FS++ ++ ++RD T S+ + FV + E A+ +
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
++I L P T + + SK+ I + + D T K Y FV++E A+ +
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGL 142
Query: 588 HLE 596
+ E
Sbjct: 143 NTE 145
>U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 3 protein.
Length = 217
Score = 32.3 bits (70), Expect = 0.28
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +3
Query: 393 NPNHTIFIGRLNPRTPQETIESE----FSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYS 560
NPNHTI++ LN + ++ ++ F++F +II R K + A + +++ S
Sbjct: 5 NPNHTIYVNNLNEKVKKDELKRSLHMVFTQFGEIIQLMSFR---KEKMRGQAHIVFKEVS 61
Query: 561 CMEKALREM 587
ALR +
Sbjct: 62 SASNALRAL 70
Score = 32.3 bits (70), Expect = 0.28
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +3
Query: 390 GNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCME 569
G PN+ +F + T E I++ FS+F + R + + +K +AF+EYE E
Sbjct: 139 GLPNNILFCSNIPEGTEPEQIQTIFSQFPGLREVRWMPN-----TKDFAFIEYESEDLSE 193
Query: 570 KA 575
A
Sbjct: 194 PA 195
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 32.3 bits (70), Expect = 0.28
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
I++G ++ ++ + F F I + D TG K +AFVEYE A M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 588 HLEYIDG 608
+ + + G
Sbjct: 164 NGQMLGG 170
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 32.3 bits (70), Expect = 0.28
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
I++G ++ ++ + F F I + D TG K +AFVEYE A M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 588 HLEYIDG 608
+ + + G
Sbjct: 164 NGQMLGG 170
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 32.3 bits (70), Expect = 0.28
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREM 587
I++G ++ ++ + F F I + D TG K +AFVEYE A M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 588 HLEYIDG 608
+ + + G
Sbjct: 164 NGQMLGG 170
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 31.1 bits (67), Expect = 0.65
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEY----EKYSCME 569
+F+ L+ T +E I+ E SKF KI + + +G SK AFV + E +C+E
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCIE 322
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 31.1 bits (67), Expect = 0.65
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 408 IFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSK 527
+FIG+L+ + +E + F+KF I C ++RD GKS+
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSR 182
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 408 IFIGRLNPRTPQET-IESEFSKFDKIIHCRLVRDLVTGKSKQYAFVE-YEKYSCMEKALR 581
+F+G++ PR ET F K+ + C ++RD T SK FV Y + +E
Sbjct: 57 MFVGQI-PRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 582 EMHLEYIDG 608
+++ I+G
Sbjct: 116 LHNIKVIEG 124
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 31.1 bits (67), Expect = 0.65
Identities = 14/72 (19%), Positives = 31/72 (43%)
Frame = +3
Query: 375 NKRVKGNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEK 554
N N T+++G ++ + + F F ++ + D +GK + + FVE++
Sbjct: 2 NTNFPHNRKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDM 61
Query: 555 YSCMEKALREMH 590
A+ M+
Sbjct: 62 AEDAAMAIDNMN 73
>AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical
protein Y51A2D.12 protein.
Length = 334
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = -2
Query: 344 YCSIMRLYV-CTINRTNFYWIVFCGIFFKICFAVLGHFLL---LYQSKMKNI 201
Y S Y+ T R+N Y+ + + F CF ++ + L LY K K +
Sbjct: 164 YSSTANFYIDTTYGRSNIYYFLMPALIFLTCFNIVFNVLAGIRLYNMKKKGV 215
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 405 TIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEY 548
T+ I ++ T +E FS + R++ D TG+SK +VE+
Sbjct: 26 TLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEF 73
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 405 TIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEY 548
T+ I ++ T +E FS + R++ D TG+SK +VE+
Sbjct: 171 TLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEF 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,870,383
Number of Sequences: 27780
Number of extensions: 257884
Number of successful extensions: 789
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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