Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9g15
         (661 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025716-20|AAT39977.2|  946|Caenorhabditis elegans Hypothetical...    31   0.96 
AC006610-1|AAK85447.4|  360|Caenorhabditis elegans Hypothetical ...    29   2.2  
U23171-1|AAC46702.2|  334|Caenorhabditis elegans Serpentine rece...    29   2.9  
Z81564-11|CAB04576.1|  436|Caenorhabditis elegans Hypothetical p...    28   5.1  
AF022982-3|AAB69932.1|  670|Caenorhabditis elegans Hypothetical ...    28   6.8  
AY835433-1|AAX37360.1|  331|Caenorhabditis elegans bZIP transcri...    27   8.9  
AY835432-1|AAX37359.1|  467|Caenorhabditis elegans bZIP transcri...    27   8.9  
AF016440-2|AAB65905.2|  331|Caenorhabditis elegans Abnormal ever...    27   8.9  
AF016440-1|ABA54419.1|  467|Caenorhabditis elegans Abnormal ever...    27   8.9  

>AC025716-20|AAT39977.2|  946|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.18a protein.
          Length = 946

 Score = 30.7 bits (66), Expect = 0.96
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 7/51 (13%)
 Frame = -1

Query: 511 KGWPIGTPLLGNLSQVFRSRRQVSQPIV---SGCRNTSTL----SANCSVE 380
           KGW   TP +  ++ + +S  +V++P     SG  NT TL      NCS E
Sbjct: 91  KGWDQNTPSISEIAALTKSFNRVAKPFASNWSGSYNTDTLKEWGEPNCSAE 141


>AC006610-1|AAK85447.4|  360|Caenorhabditis elegans Hypothetical
           protein C30F12.1 protein.
          Length = 360

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 24/83 (28%), Positives = 38/83 (45%)
 Frame = +3

Query: 366 SKYNHSTEQFADKVDVFLQPETIGCETWRRLRNTCDKLPSSGVPMGHPLRRGGIHERRSP 545
           +K  +STEQ +  ++      TIG ++  R+ +   +L   G+P G P   G    R SP
Sbjct: 125 TKLGYSTEQLSHVLN------TIGVDS--RMDDVLSELVKMGLPGGKPENSGKSGSRNSP 176

Query: 546 FSVKLMNSGVHSSQTNPGFSRQP 614
               +M S   SS  +   S +P
Sbjct: 177 --EPIMTSSASSSSASSSSSHRP 197


>U23171-1|AAC46702.2|  334|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 55 protein.
          Length = 334

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -1

Query: 220 LVSSPSLRKSGRSFLFRTCFTPDIVIYLNFSAIHQIIYTI 101
           L  SPS+  + + FL  TCF   I+I L F   H+ +  I
Sbjct: 36  LTKSPSILTNLKFFLINTCFLQIILISLGFFTQHRSLPNI 75


>Z81564-11|CAB04576.1|  436|Caenorhabditis elegans Hypothetical
           protein K05C4.11 protein.
          Length = 436

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = -3

Query: 656 RIIIQLVXEYGSTSWLPAEPRVGLR*VNSRIHQLYAEGRPTL-VNTASSQRMAH 498
           RI+++ + + G  S +  E R+G + V + +  L  EG  ++  N+   Q M H
Sbjct: 272 RIVVRFITQEGPPSSMIGEERIGFKVVWTAVEGLIGEGDESVNGNSCKDQFMCH 325


>AF022982-3|AAB69932.1|  670|Caenorhabditis elegans Hypothetical
           protein T23B12.6 protein.
          Length = 670

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +3

Query: 321 FPYNLPDDSLDFILTSKYNHSTEQFADKVDVFLQPETIGCETW 449
           FP  + D+  D ++T  +     +    + VFL P+T  C  W
Sbjct: 365 FPLRMKDN--DLLVTELFRDPNGETITSLSVFLTPKTSACGNW 405


>AY835433-1|AAX37360.1|  331|Caenorhabditis elegans bZIP
           transcription factor FOS-1b protein.
          Length = 331

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -2

Query: 129 LLSIKSYIQLVDSKRQREHSTYDCNRI 49
           L S+K+Y++  D K  RE  T++ NR+
Sbjct: 80  LNSLKNYLETHDCKLSREERTHEINRL 106


>AY835432-1|AAX37359.1|  467|Caenorhabditis elegans bZIP
           transcription factor FOS-1a protein.
          Length = 467

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -2

Query: 129 LLSIKSYIQLVDSKRQREHSTYDCNRI 49
           L S+K+Y++  D K  RE  T++ NR+
Sbjct: 216 LNSLKNYLETHDCKLSREERTHEINRL 242


>AF016440-2|AAB65905.2|  331|Caenorhabditis elegans Abnormal
           eversion of vulva protein5, isoform a protein.
          Length = 331

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -2

Query: 129 LLSIKSYIQLVDSKRQREHSTYDCNRI 49
           L S+K+Y++  D K  RE  T++ NR+
Sbjct: 80  LNSLKNYLETHDCKLSREERTHEINRL 106


>AF016440-1|ABA54419.1|  467|Caenorhabditis elegans Abnormal
           eversion of vulva protein5, isoform b protein.
          Length = 467

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -2

Query: 129 LLSIKSYIQLVDSKRQREHSTYDCNRI 49
           L S+K+Y++  D K  RE  T++ NR+
Sbjct: 216 LNSLKNYLETHDCKLSREERTHEINRL 242


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,868,125
Number of Sequences: 27780
Number of extensions: 307512
Number of successful extensions: 855
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)