Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9g10
         (731 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82287-2|CAB05312.1|  502|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z70782-5|CAA94843.1|  322|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z82287-2|CAB05312.1|  502|Caenorhabditis elegans Hypothetical
           protein ZK550.2 protein.
          Length = 502

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 10/46 (21%), Positives = 25/46 (54%)
 Frame = +1

Query: 463 ITLSPLFLAMWPKNSNILLKQMVESLVWILSCLNMDALVRYAVHGI 600
           + +S  +++MWP  S +     ++ L W+++  NM   +   ++G+
Sbjct: 50  VQISVYYMSMWPYLSGLDKTADMDFLGWVVAACNMGCTITNPLYGL 95


>Z70782-5|CAA94843.1|  322|Caenorhabditis elegans Hypothetical
           protein R04B5.7 protein.
          Length = 322

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 609 LPPAPHLEGINVVRLDVTYKEKKEIFDSKFTQWMDHKNASQ 731
           +PPAP         L  TY E++ +F   + Q MD+K+ +Q
Sbjct: 172 VPPAPQ------PMLQATYPEQRTVFGPSYLQQMDYKHHAQ 206


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,785,078
Number of Sequences: 27780
Number of extensions: 351688
Number of successful extensions: 773
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)