Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9g08
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0843 + 25315089-25315417,25317274-25317310,25317439-253176... 44 1e-04
12_01_1059 - 10934937-10935446,10938224-10938271,10938383-109386... 43 2e-04
02_05_1073 - 33895608-33895880,33896133-33896180,33896273-338965... 40 0.003
01_06_0322 + 28472680-28473053,28474434-28474470,28474578-284748... 38 0.006
08_01_0404 - 3590296-3590409,3590529-3590819,3592414-3592461,359... 38 0.010
02_01_0735 + 5484398-5484400,5484670-5484773,5485012-5485138,548... 36 0.041
01_06_1821 + 40126389-40126508,40126589-40126646,40126782-401268... 35 0.054
06_03_0725 - 23894215-23894412,23894660-23894803,23895058-238951... 33 0.16
03_03_0016 - 13761007-13761489,13761929-13762096,13763086-137631... 33 0.22
03_06_0541 - 34607071-34607353,34608167-34608399,34609093-346092... 33 0.29
10_08_0662 + 19662748-19662826,19662868-19663136,19664360-196645... 31 0.67
06_03_1313 - 29252335-29252446,29253430-29253671,29253770-292538... 31 0.88
12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776 31 1.2
02_01_0413 - 3028946-3031111 31 1.2
10_08_0661 + 19656669-19656905,19657390-19657869,19659519-19659800 29 4.7
10_08_0005 + 14030414-14030519,14030612-14030921,14031012-140312... 29 4.7
07_03_0796 + 21572131-21572204,21573427-21573482,21573580-215736... 28 6.2
01_06_1413 + 37149038-37149295,37149392-37149603,37149687-371499... 28 6.2
10_08_0211 + 15899017-15901392 28 8.2
05_05_0149 - 22733703-22736216 28 8.2
05_04_0307 + 20066169-20066410,20066803-20066858,20067490-200675... 28 8.2
>06_03_0843 +
25315089-25315417,25317274-25317310,25317439-25317675,
25317745-25317792,25318144-25318577,25318675-25318759
Length = 389
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/78 (30%), Positives = 42/78 (53%)
Frame = +3
Query: 462 ILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYS 641
+LY HGN+ + L + + LN +++ +DY GYG S+ KP+E+ D+ Y
Sbjct: 80 LLYSHGNAADLGQMYELFV-ELSSHLNVNLMGYDYSGYGQSSG-KPSEQNTYSDIEAAYR 137
Query: 642 WLLKTLDLEEEPTVFVWG 695
L++T EE + ++G
Sbjct: 138 CLVETYGATEE-NIILYG 154
>12_01_1059 -
10934937-10935446,10938224-10938271,10938383-10938619,
10938711-10938747,10941018-10941286
Length = 366
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/74 (31%), Positives = 39/74 (52%)
Frame = +3
Query: 462 ILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYS 641
+LY HGN+ ++L ++ F L +V+ +DY GYG S+ KP+E D+ Y
Sbjct: 60 LLYSHGNAADLGHLYQLFLHLSFN-LRVNVLGYDYSGYGQSSG-KPSEHNTYADIEAAYK 117
Query: 642 WLLKTLDLEEEPTV 683
L++ +EE +
Sbjct: 118 CLIENFGAKEEEII 131
>02_05_1073 -
33895608-33895880,33896133-33896180,33896273-33896509,
33897233-33897269,33898603-33898913
Length = 301
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/74 (32%), Positives = 37/74 (50%)
Frame = +3
Query: 462 ILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYS 641
+LY HGN+ L + + L +++++DY GYG ST KP+E D+ VY
Sbjct: 74 LLYSHGNAADLGQMLGLFL-ELRAHLRVNIMSYDYSGYGASTG-KPSEYNTYCDIEAVYD 131
Query: 642 WLLKTLDLEEEPTV 683
L K +E E +
Sbjct: 132 CLTKVYGIEPEDLI 145
>01_06_0322 +
28472680-28473053,28474434-28474470,28474578-28474814,
28474891-28474938,28475263-28475661
Length = 364
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/84 (27%), Positives = 39/84 (46%)
Frame = +3
Query: 432 HELKNSRNPVILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDSTKVKPTERG 611
H + +LY HGN+ + L + + + L ++ +DY GYG ST KPTE
Sbjct: 85 HVRHERASATLLYSHGNAADLGQMYGLFV-ELSRRLRINLFGYDYSGYGRSTG-KPTECN 142
Query: 612 VVEDLFHVYSWLLKTLDLEEEPTV 683
D+ Y+ L + + +E +
Sbjct: 143 TYADIEAAYNCLKEKYGVADEDII 166
>08_01_0404 -
3590296-3590409,3590529-3590819,3592414-3592461,
3592559-3592795,3593668-3593704,3594311-3594627
Length = 347
Score = 37.5 bits (83), Expect = 0.010
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +3
Query: 450 RNPV----ILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDSTKVKPTERGVV 617
RNP +LY HGN+ + L + + L +++ +DY GYG ST KP+E
Sbjct: 68 RNPAARLTVLYSHGNAADLGQLYDLFV-QLKVNLKVNLMGYDYSGYGASTG-KPSEENTY 125
Query: 618 EDLFHVYSWLLKTLDLEEEPTV 683
D+ VY L + +E +
Sbjct: 126 ADIEAVYQCLETEYGISQEDLI 147
>02_01_0735 +
5484398-5484400,5484670-5484773,5485012-5485138,
5485212-5485306,5485597-5485720,5486523-5486603,
5487177-5487275,5487416-5487583,5487688-5487775,
5487860-5487930,5488000-5488068,5488368-5488499,
5488740-5488946
Length = 455
Score = 35.5 bits (78), Expect = 0.041
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 441 KNSRNPVILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYG 578
+N+ P ++YCHGNS RA + + + N V T D+ G G
Sbjct: 22 ENTSLPCVIYCHGNSGCRADANEAAV--ILLPANITVFTLDFSGSG 65
>01_06_1821 +
40126389-40126508,40126589-40126646,40126782-40126837,
40127076-40127176,40127336-40127405,40127501-40127570,
40127970-40128026,40128110-40128177,40128258-40128338,
40128474-40128551,40128644-40128799,40128874-40128933,
40129253-40129317,40130002-40130059
Length = 365
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +3
Query: 435 ELKNSRNPVILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDSTKVKP 599
E +S NP +L+ HG + +A +R + V + N+H + FD+ G+G S K +P
Sbjct: 117 EAGSSSNPPVLFIHGFPS-QAYSYR-NVLPVVSD-NYHAIAFDWLGFGFSDKPQP 168
>06_03_0725 -
23894215-23894412,23894660-23894803,23895058-23895126,
23895197-23895267,23895357-23895444,23895522-23895707,
23895805-23895903,23896002-23896082,23896575-23896634,
23896656-23896779,23897026-23897120,23897205-23897331,
23897559-23897662,23897883-23897945
Length = 502
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 444 NSRNPVILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYG 578
N+ P ++YCHGNS RA + + + N + T D+ G G
Sbjct: 43 NTALPCVIYCHGNSGCRADANEAAV--ILLPSNITLFTLDFAGSG 85
>03_03_0016 -
13761007-13761489,13761929-13762096,13763086-13763130,
13763380-13763447,13763532-13763586,13763659-13763814,
13763904-13764002,13764792-13764872,13765513-13765636,
13765938-13766032,13766434-13766560,13766768-13766871,
13767278-13767359,13768012-13768049
Length = 574
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 456 PVILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYG 578
P ++YCHGNS RA I + N V T D+ G G
Sbjct: 66 PCVIYCHGNSGCRADASEAAI--ILLPSNITVFTLDFSGSG 104
>03_06_0541 -
34607071-34607353,34608167-34608399,34609093-34609275,
34609357-34609659
Length = 333
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = +3
Query: 543 FHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYSWLLKTLDLEEEPTVFVWGH 698
+ V D RGYG +T P E +FH+ L+ LD E P VFV GH
Sbjct: 59 YRCVAPDLRGYGGTTA--PPEH-TSYTIFHLVGDLVALLDALELPQVFVVGH 107
>10_08_0662 +
19662748-19662826,19662868-19663136,19664360-19664571,
19665356-19665623,19665709-19666002
Length = 373
Score = 31.5 bits (68), Expect = 0.67
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 462 ILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDS 584
++Y HG S R R ++ +EL ++V FD GYG+S
Sbjct: 98 VVYSHGFSGGRMDSPRAS-QALLKELGVYMVAFDRAGYGES 137
>06_03_1313 -
29252335-29252446,29253430-29253671,29253770-29253848,
29254991-29255130,29255262-29255571,29255810-29255952,
29256106-29256306,29256453-29256581,29256921-29257199,
29258036-29259720,29261255-29261764,29261901-29262108,
29264347-29264458,29264594-29264763
Length = 1439
Score = 31.1 bits (67), Expect = 0.88
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +3
Query: 411 LKTNNTFHELKNSRNPVILYCHGNSNH--RASPHRLKIYS--VFQELNFHVVTFDYRGYG 578
L+ N+ H L SR V+ CH S+H + R +++S V ++N HV + +G+
Sbjct: 432 LQQQNSLHHLVMSRGNVLTQCHLGSDHAEKLLDKRNQLHSELVSSQINEHVGLTNLQGHY 491
Query: 579 DSTK 590
+ T+
Sbjct: 492 EQTQ 495
>12_02_1247 - 27322920-27323175,27323252-27323490,27324309-27324776
Length = 320
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +3
Query: 543 FHVVTFDYRGYGDSTKVKPTERGVVEDLFHVYSWLLKTLDLEEEPTVFVWGH 698
F + D RGYGDST P + +FH+ L+ LD P V V GH
Sbjct: 56 FRALAPDLRGYGDST--VPDDPAAY-TVFHIVGDLVALLDHLALPKVMVVGH 104
>02_01_0413 - 3028946-3031111
Length = 721
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 423 NTFHELKNSRNPVILYCHGNSNHRASP 503
NT H LKN RN +L GN H A P
Sbjct: 416 NTLHILKNLRNLTVLLLGGNFMHEAMP 442
>10_08_0661 + 19656669-19656905,19657390-19657869,19659519-19659800
Length = 332
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 462 ILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDS 584
I++ HG + R R V +EL ++V FD GYG+S
Sbjct: 61 IVFSHGFTGSRLDSLRASP-EVAEELGVYMVAFDRAGYGES 100
>10_08_0005 +
14030414-14030519,14030612-14030921,14031012-14031233,
14031326-14031565,14031727-14031804,14031841-14032036,
14032084-14032265,14032351-14032433,14032526-14032650,
14032762-14032840,14032924-14033092,14033171-14033231,
14033312-14033434,14033552-14033749,14033927-14033995,
14034244-14034320,14034475-14034562
Length = 801
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 381 PNSEIKDVADLKTNNTFHELKNSRN-PVILYCHGNSNHRASPHRLKIYSVFQELNFHVVT 557
P+ ++ D + L F K+S + P IL HG + + K + L F+++
Sbjct: 534 PSDDLSDGSKLPFEAIFVSCKDSSHKPTILVLHGGPHSVSVSSYSKTSAFLASLGFNLLI 593
Query: 558 FDYRG 572
+YRG
Sbjct: 594 VNYRG 598
>07_03_0796 +
21572131-21572204,21573427-21573482,21573580-21573671,
21574103-21574205,21574297-21574434,21574654-21574907
Length = 238
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 306 GRNLNIEFRSIVDNFLIRLGIWHILPNSEIKDVADLKTNNTFHELK 443
G L+ FR +VDNFL +G W + + + D++ T H+LK
Sbjct: 198 GLKLSPWFRLVVDNFL--MGWWDHVEKGTLNEAVDME---TIHKLK 238
>01_06_1413 +
37149038-37149295,37149392-37149603,37149687-37149951,
37150099-37150407
Length = 347
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +3
Query: 462 ILYCHGNSNHRASPHRLKIYSVFQELNFHVVTFDYRGYGDSTKVKPTERGVVED 623
I++ HG ++ + S + + +EL +++ FD GYGDS P +RG+ D
Sbjct: 68 IIFSHGFASTKESDFPVS-QELAEELGIYLLYFDRAGYGDS-DANP-KRGLKSD 118
>10_08_0211 + 15899017-15901392
Length = 791
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = -3
Query: 329 ELNVEVSPACNAATRRAIVVQVSRKVYFLWTVLLYRNIRGSTATWNTRTPAVSEAPVAKR 150
E+ V ++P+ NAA + + V +W +L + NI+ S +P +EA +
Sbjct: 670 EMLVHIAPSWNAAAHKKCLSTGGEFVTQIWAILSHCNIQESNLWPQQESPNDNEAEQQEE 729
Query: 149 S 147
S
Sbjct: 730 S 730
>05_05_0149 - 22733703-22736216
Length = 837
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -1
Query: 397 LISEFGSICQIPNLMRKLSTIERNSMLRFLPHVTLQLDG 281
L + F S+C I + K++T++++ + F P +L G
Sbjct: 699 LENRFSSLCGIQEEISKIATLDKSDEVHFTPFQAAKLQG 737
>05_04_0307 +
20066169-20066410,20066803-20066858,20067490-20067581,
20068400-20068502,20068623-20068760,20068898-20069148
Length = 293
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 306 GRNLNIEFRSIVDNFLIRLGIWHILPNSEIKDVADLKT 419
G L+ FR +VDNFL+R W + +++ D+KT
Sbjct: 254 GIKLSPWFRLVVDNFLMRW--WDHVEQGTLEEAIDMKT 289
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,112,134
Number of Sequences: 37544
Number of extensions: 333222
Number of successful extensions: 931
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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