Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9g06
(711 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070660-1|AAL48131.1| 200|Drosophila melanogaster RH04437p pro... 45 9e-05
AE014297-2840|AAF55794.1| 381|Drosophila melanogaster CG5494-PA... 45 9e-05
EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic ac... 31 2.0
AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic ac... 31 2.0
AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-P... 31 2.0
AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-P... 31 2.0
U21717-1|AAA92045.1| 743|Drosophila melanogaster nervy protein. 30 3.6
BT004898-1|AAO47876.1| 743|Drosophila melanogaster LD17501p pro... 30 3.6
AY070569-1|AAL48040.1| 241|Drosophila melanogaster RE11283p pro... 30 3.6
AE014297-4671|AAF57092.1| 241|Drosophila melanogaster CG12045-P... 30 3.6
AE013599-3848|AAF47191.2| 743|Drosophila melanogaster CG3385-PA... 30 3.6
AE014297-4726|AAF57134.2| 511|Drosophila melanogaster CG15564-P... 27 4.4
>AY070660-1|AAL48131.1| 200|Drosophila melanogaster RH04437p
protein.
Length = 200
Score = 45.2 bits (102), Expect = 9e-05
Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Frame = +2
Query: 239 LDTPEVAQARAAHISALQQASKNNPNPN---DDGSYDPRWD 352
+DTPEV A+AAH +AL QAS + + DDGSYD RW+
Sbjct: 81 VDTPEVQHAKAAHYAALSQASAHGGASHGSWDDGSYDGRWE 121
Score = 30.3 bits (65), Expect = 2.7
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 173 AHASGWAGP-PANIALSQDGRNILDTPEVAQARAAHISALQQASKNNPNPNDDGSY 337
++ASG+A P +I + +G + + EV ARAAH++AL A+ + P GSY
Sbjct: 129 SYASGYAHKGPIHIPVIHNGVPV-EPAEVQHARAAHLNAL--AAAGHGAPASHGSY 181
>AE014297-2840|AAF55794.1| 381|Drosophila melanogaster CG5494-PA
protein.
Length = 381
Score = 45.2 bits (102), Expect = 9e-05
Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Frame = +2
Query: 239 LDTPEVAQARAAHISALQQASKNNPNPN---DDGSYDPRWD 352
+DTPEV A+AAH +AL QAS + + DDGSYD RW+
Sbjct: 262 VDTPEVQHAKAAHYAALSQASAHGGASHGSWDDGSYDGRWE 302
Score = 33.1 bits (72), Expect = 0.38
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +2
Query: 146 VACLALACGAHASGWAGPPANIALSQDGRNILDTPEVAQARAAHISALQQASKN 307
V A A GA+A +A P +I + G +DTPEV A+AAH +A A+ N
Sbjct: 102 VYAAAHAHGAYAP-YAHGPIHIPVLTHGGVPVDTPEVQHAKAAHAAAHAAAAHN 154
Score = 30.3 bits (65), Expect = 2.7
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 173 AHASGWAGP-PANIALSQDGRNILDTPEVAQARAAHISALQQASKNNPNPNDDGSY 337
++ASG+A P +I + +G + + EV ARAAH++AL A+ + P GSY
Sbjct: 310 SYASGYAHKGPIHIPVIHNGVPV-EPAEVQHARAAHLNAL--AAAGHGAPASHGSY 362
Score = 29.9 bits (64), Expect = 3.6
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 176 HASGWA-GPPANIALSQDGRNILDTPEVAQARAAHISALQQA 298
+ GWA G A++ L+ G + DTP+V A+A H +A +A
Sbjct: 166 YGGGWAYGQAAHVPLTHGGVPV-DTPDVQAAKAEHYAAHAKA 206
>EF458626-1|ABO26063.1| 560|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha7 protein.
Length = 560
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 595 CPTTMERPSSPGLECPRPPGLERSRSPGLECSPLTN 702
C M+RP G ECP PP S + G + + N
Sbjct: 379 CILRMQRPGQVGYECPPPPSSSSSSASGEKKQQIQN 414
>AJ554210-1|CAD86936.1| 542|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha7 protein.
Length = 542
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 595 CPTTMERPSSPGLECPRPPGLERSRSPGLECSPLTN 702
C M+RP G ECP PP S + G + + N
Sbjct: 357 CILRMQRPGQVGYECPPPPSSSSSSASGEKKQQIQN 392
>AE014298-2836|AAS65409.1| 560|Drosophila melanogaster CG32538-PA,
isoform A protein.
Length = 560
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 595 CPTTMERPSSPGLECPRPPGLERSRSPGLECSPLTN 702
C M+RP G ECP PP S + G + + N
Sbjct: 379 CILRMQRPGQVGYECPPPPSSSSSSASGEKKQQIQN 414
>AE014298-2835|AAF48950.3| 541|Drosophila melanogaster CG32538-PB,
isoform B protein.
Length = 541
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 595 CPTTMERPSSPGLECPRPPGLERSRSPGLECSPLTN 702
C M+RP G ECP PP S + G + + N
Sbjct: 360 CILRMQRPGQVGYECPPPPSSSSSSASGEKKQQIQN 395
>U21717-1|AAA92045.1| 743|Drosophila melanogaster nervy protein.
Length = 743
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 197 PPANIALSQDGRNILDTPEVAQARAAHISALQQASKNNPNPNDDGSYDPRWDNEEYWQ 370
P A + +D R++ +++A+A H + Q+A PNPN P EE W+
Sbjct: 404 PSAAAFMQRDERDL----RMSEAQARHAAPPQRAGNPQPNPNAAAPGAPGAGGEEEWK 457
>BT004898-1|AAO47876.1| 743|Drosophila melanogaster LD17501p
protein.
Length = 743
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 197 PPANIALSQDGRNILDTPEVAQARAAHISALQQASKNNPNPNDDGSYDPRWDNEEYWQ 370
P A + +D R++ +++A+A H + Q+A PNPN P EE W+
Sbjct: 404 PSAAAFMQRDERDL----RMSEAQARHAAPPQRAGNPQPNPNAAAPGAPGAGGEEEWK 457
>AY070569-1|AAL48040.1| 241|Drosophila melanogaster RE11283p
protein.
Length = 241
Score = 29.9 bits (64), Expect = 3.6
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 293 QASKNNPNPNDDGSYDPRWDNEEYWQQAE 379
QAS + + DDGSYDPR+++ + Q +
Sbjct: 130 QASFRSNDYGDDGSYDPRYNDPSFGQNQQ 158
>AE014297-4671|AAF57092.1| 241|Drosophila melanogaster CG12045-PA
protein.
Length = 241
Score = 29.9 bits (64), Expect = 3.6
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 293 QASKNNPNPNDDGSYDPRWDNEEYWQQAE 379
QAS + + DDGSYDPR+++ + Q +
Sbjct: 130 QASFRSNDYGDDGSYDPRYNDPSFGQNQQ 158
>AE013599-3848|AAF47191.2| 743|Drosophila melanogaster CG3385-PA
protein.
Length = 743
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 197 PPANIALSQDGRNILDTPEVAQARAAHISALQQASKNNPNPNDDGSYDPRWDNEEYWQ 370
P A + +D R++ +++A+A H + Q+A PNPN P EE W+
Sbjct: 404 PSAAAFMQRDERDL----RMSEAQARHAAPPQRAGNPQPNPNAAAPGAPGAGGEEEWK 457
>AE014297-4726|AAF57134.2| 511|Drosophila melanogaster CG15564-PA
protein.
Length = 511
Score = 27.1 bits (57), Expect(2) = 4.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 598 PTTMERPSSPGLECPRPPG 654
P+ + P PG +CP PPG
Sbjct: 332 PSPLSLPIPPGKKCPGPPG 350
Score = 21.0 bits (42), Expect(2) = 4.4
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +1
Query: 421 PRPLMERCPCCCSFMERCP 477
P+ E C C C M++ P
Sbjct: 311 PQRCCELCTCKCPAMQKSP 329
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,463,642
Number of Sequences: 53049
Number of extensions: 449133
Number of successful extensions: 1924
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1907
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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