Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9f22
         (466 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4D5X5 Cluster: Putative uncharacterized protein; n=2; ...    33   3.1  
UniRef50_A2EL80 Cluster: Putative uncharacterized protein; n=1; ...    33   4.1  
UniRef50_O51223 Cluster: Putative uncharacterized protein BB0205...    32   7.1  
UniRef50_P27546 Cluster: Microtubule-associated protein 4; n=32;...    32   7.1  
UniRef50_Q17644 Cluster: Putative uncharacterized protein; n=3; ...    31   9.4  

>UniRef50_Q4D5X5 Cluster: Putative uncharacterized protein; n=2;
            Trypanosoma cruzi|Rep: Putative uncharacterized protein -
            Trypanosoma cruzi
          Length = 1150

 Score = 33.1 bits (72), Expect = 3.1
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
 Frame = +2

Query: 176  EPKIEEIITAARQQTTKCKIPLISTSGNQRTKPMNNIENTIVT----NSRPRLTNRTRDQ 343
            E K+ EI+ A+ + T + +      S  + T+     EN + +    NSR R   RT  +
Sbjct: 1006 EEKMSEIMEASGEHTLQPR-----NSQREATEEGKEEENMLTSPSQFNSRSRSGRRTAGK 1060

Query: 344  GMVPGRTLHTIPMLRIRPEREKLLPAL 424
              V  R + T    R+RP++E+++P++
Sbjct: 1061 APVASRRVITEDGWRVRPDKEEVVPSM 1087


>UniRef50_A2EL80 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1851

 Score = 32.7 bits (71), Expect = 4.1
 Identities = 16/78 (20%), Positives = 39/78 (50%)
 Frame = +2

Query: 233 IPLISTSGNQRTKPMNNIENTIVTNSRPRLTNRTRDQGMVPGRTLHTIPMLRIRPEREKL 412
           I  +S + + +  P+  I+    +N +  +  R  +   +P + +   P++ + PE ++L
Sbjct: 148 INTLSKNISTKKMPVREIQIPTASNDKSSIGFRGINTQFIPPKPVFQNPIVYLTPEEKRL 207

Query: 413 LPALKRPSTIPKRVTNEN 466
           L   K+P  I   +T+++
Sbjct: 208 LKKTKKPKLIDTIITDQS 225


>UniRef50_O51223 Cluster: Putative uncharacterized protein BB0205;
           n=4; Borrelia|Rep: Putative uncharacterized protein
           BB0205 - Borrelia burgdorferi (Lyme disease spirochete)
          Length = 525

 Score = 31.9 bits (69), Expect = 7.1
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = +2

Query: 182 KIEEIITAARQQTTKCKIPLISTSGNQRTKPMNNIENTIVTNSRPRL 322
           KIEEII     +    +I +   +GN +  P+NN+++ ++ NS P L
Sbjct: 459 KIEEIIMDLENK----EILIKDANGNYKKNPLNNVDDFVIKNSIPEL 501


>UniRef50_P27546 Cluster: Microtubule-associated protein 4; n=32;
           Euteleostomi|Rep: Microtubule-associated protein 4 - Mus
           musculus (Mouse)
          Length = 1125

 Score = 31.9 bits (69), Expect = 7.1
 Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
 Frame = +2

Query: 164 IVSDEPKIEEIITAARQQTTKCKIPLISTSGNQRTKPMNNIENTI--VTNSRPRLTNRTR 337
           + + +P       A  Q T+  K P  +TSG    KPM+    ++    + RP     T 
Sbjct: 675 LATTQPAKTSTSKAKTQPTSLPKQPAPTTSGGLNKKPMSLASGSVPAAPHKRPAAATATA 734

Query: 338 DQGMVPGRTLHTIPMLRIRPEREKLLPALKRPSTIP 445
               +P R +   P+   +   ++  P+  +PS+ P
Sbjct: 735 RPSTLPARDVKPKPITEAKVAEKRTSPS--KPSSAP 768


>UniRef50_Q17644 Cluster: Putative uncharacterized protein; n=3;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 167

 Score = 31.5 bits (68), Expect = 9.4
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +2

Query: 179 PKI-EEIITAARQQTTKCKIPLISTSGNQRTKPMNNIENTIVTNSRP 316
           P+I ++ + + + +TT  KI   +TS    T P N IE T  ++SRP
Sbjct: 61  PQIRQKFVPSTKMETTTTKIVTFTTSDRIVTSPRNVIEVTTSSDSRP 107


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,315,129
Number of Sequences: 1657284
Number of extensions: 7641140
Number of successful extensions: 16828
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16824
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25191138900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)