Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9f22
         (466 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   1.3  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   6.9  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    23   6.9  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 4/63 (6%)
 Frame = +2

Query: 272 PMNNIENTIVTNSRPRLTNRTRDQGM----VPGRTLHTIPMLRIRPEREKLLPALKRPST 439
           PMN  ++    +S  ++     D+G      PG T   +P    RP R   L   K    
Sbjct: 770 PMNISDDYDGQDSDTKIPVAEDDEGYEEQDTPGETFDELPTASARPRRLSELSVKKSKKP 829

Query: 440 IPK 448
           IPK
Sbjct: 830 IPK 832


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 136 CDYFDDYVTH 165
           CDY D Y+TH
Sbjct: 6   CDYCDTYLTH 15


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 25/74 (33%), Positives = 32/74 (43%)
 Frame = +2

Query: 236 PLISTSGNQRTKPMNNIENTIVTNSRPRLTNRTRDQGMVPGRTLHTIPMLRIRPEREKLL 415
           PLI T  + R    +  EN IV   RP  T+R     +  G T H  P   I P   + +
Sbjct: 328 PLILTCDHLRNVDCDKSENVIVDYDRP--TSRP----VASGPTSHYYPS-HI-PAGSQPV 379

Query: 416 PALKRPSTIPKRVT 457
           PA+  P   P R T
Sbjct: 380 PAVVNPQQ-PSRPT 392


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 450,714
Number of Sequences: 2352
Number of extensions: 7264
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40395045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)