Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9f22
(466 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70265-3|CAA94201.2| 167|Caenorhabditis elegans Hypothetical pr... 31 0.31
AC006720-1|AAF60446.1| 350|Caenorhabditis elegans Hypothetical ... 29 1.2
AF016444-12|AAB65927.2| 295|Caenorhabditis elegans Serpentine r... 29 2.2
U28928-10|AAN63432.2| 388|Caenorhabditis elegans Hypothetical p... 28 2.9
AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical... 28 2.9
U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical p... 27 5.0
Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical p... 27 5.0
Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical p... 27 5.0
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 27 5.0
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 27 5.0
AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C... 27 5.0
AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B... 27 5.0
AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A... 27 5.0
AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein. 27 5.0
Z81473-6|CAB03895.2| 657|Caenorhabditis elegans Hypothetical pr... 27 6.6
U40958-5|AAA81764.1| 654|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z81533-11|CAE17829.1| 355|Caenorhabditis elegans Hypothetical p... 27 8.8
Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical p... 27 8.8
Z70284-12|CAB54278.1| 549|Caenorhabditis elegans Hypothetical p... 27 8.8
Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical p... 27 8.8
U80024-8|AAK18887.3| 288|Caenorhabditis elegans Serpentine rece... 27 8.8
>Z70265-3|CAA94201.2| 167|Caenorhabditis elegans Hypothetical
protein C05A9.2 protein.
Length = 167
Score = 31.5 bits (68), Expect = 0.31
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 179 PKI-EEIITAARQQTTKCKIPLISTSGNQRTKPMNNIENTIVTNSRP 316
P+I ++ + + + +TT KI +TS T P N IE T ++SRP
Sbjct: 61 PQIRQKFVPSTKMETTTTKIVTFTTSDRIVTSPRNVIEVTTSSDSRP 107
>AC006720-1|AAF60446.1| 350|Caenorhabditis elegans Hypothetical
protein Y17G9B.5 protein.
Length = 350
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 146 SMIMSLIVSDEPKIEEI-ITAARQQTTKCKIPLISTSGNQRTKPMNNIEN 292
S + +++S+ K +E+ + AA+ IP I+ +GN + +P+N +N
Sbjct: 222 SPMQQILISELRKGDEVFVDAAKVYLQDRVIPFITLTGNTKLEPLNEFKN 271
>AF016444-12|AAB65927.2| 295|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 6 protein.
Length = 295
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -2
Query: 390 ILSMGIVCSVLPGTMP*SLVRLVNRGRELVTIVFSMLFI 274
+ S+G++CSVL M ++ + + R+ + + F LFI
Sbjct: 17 VTSIGVICSVLTIVMNIYFIKRIGKTRQKMILFFYRLFI 55
>U28928-10|AAN63432.2| 388|Caenorhabditis elegans Hypothetical
protein C44B7.12 protein.
Length = 388
Score = 28.3 bits (60), Expect = 2.9
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +2
Query: 218 TTKCKIPL-ISTSGNQRTKPMNNIENTIVTNSRPR---LTNRTRDQGMVPGRTL 367
T K KIPL I S N +K N N+ R R + T D+G++PG TL
Sbjct: 283 TNKYKIPLEICLSSNVYSKTTTNYRNSHFNYWRKRGVPVFICTDDKGVIPGATL 336
>AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical
protein Y41D4B.11 protein.
Length = 349
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +2
Query: 182 KIEEIITAARQQTTKCKIPLISTSGNQRTKPMNNIENTIVTNSRPRLTNRTRD 340
K E ++ A Q+TT ++ G Q+T+ +NN +T + R ++ + RD
Sbjct: 279 KFEPLMAKAGQKTTLLLHSMLQKGGGQKTEYLNN--STKIQEERQKVIDAYRD 329
>U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical protein
F59A3.2a protein.
Length = 975
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 161 LIVSDEPKIEEIITAARQQTTKCKIPLISTSGNQRTKPMNNIENTIVTNSRPRLTNRTR 337
L+V + PK+E R + +IP S ++ T+ N N ++ RP+L+ T+
Sbjct: 911 LVVRNGPKVETEWYMMRGVQLRDEIPASSNQDSKLTQLQKNNNNDPISQQRPQLSFGTQ 969
>Z69664-10|CAC42313.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 224 KCKIPLISTSGNQRTKP-MNNIENTIVTNSRPRLTNRTRDQGMVP 355
+C + + +R P M N+ I NSR L N +R + +VP
Sbjct: 831 ECTVTIDGVIKQRRLPPQMENLAERIALNSRYYLKNNSRSEPLVP 875
>Z69664-9|CAA93519.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 224 KCKIPLISTSGNQRTKP-MNNIENTIVTNSRPRLTNRTRDQGMVP 355
+C + + +R P M N+ I NSR L N +R + +VP
Sbjct: 831 ECTVTIDGVIKQRRLPPQMENLAERIALNSRYYLKNNSRSEPLVP 875
>Z68880-11|CAC42342.1| 1311|Caenorhabditis elegans Hypothetical
protein T14G10.2b protein.
Length = 1311
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 224 KCKIPLISTSGNQRTKP-MNNIENTIVTNSRPRLTNRTRDQGMVP 355
+C + + +R P M N+ I NSR L N +R + +VP
Sbjct: 831 ECTVTIDGVIKQRRLPPQMENLAERIALNSRYYLKNNSRSEPLVP 875
>Z68880-10|CAA93100.2| 1470|Caenorhabditis elegans Hypothetical
protein T14G10.2a protein.
Length = 1470
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 224 KCKIPLISTSGNQRTKP-MNNIENTIVTNSRPRLTNRTRDQGMVP 355
+C + + +R P M N+ I NSR L N +R + +VP
Sbjct: 831 ECTVTIDGVIKQRRLPPQMENLAERIALNSRYYLKNNSRSEPLVP 875
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +2
Query: 140 IISMIMSLIVSDEPKIEEIITAARQQTTKCKIPLISTSGNQRTKPMNNIENTIVTNSRP 316
+I +I L+ ++P ++ I + +Q K + I RT +EN ++++S+P
Sbjct: 137 VIPVIPRLVFDEKPDLDPITVKSSEQIKKELLSFIKND-EDRTIMEAKMENMLISDSKP 194
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = +2
Query: 140 IISMIMSLIVSDEPKIEEIITAARQQTTKCKIPLISTSGNQRTKPMNNIENTIVTNSRP 316
+I +I L+ ++P ++ I + +Q K + I RT +EN ++++S+P
Sbjct: 137 VIPVIPRLVFDEKPDLDPITVKSSEQIKKELLSFIKND-EDRTIMEAKMENMLISDSKP 194
>AF308449-1|AAL09435.1| 1347|Caenorhabditis elegans PXF isoform C
protein.
Length = 1347
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 224 KCKIPLISTSGNQRTKP-MNNIENTIVTNSRPRLTNRTRDQGMVP 355
+C + + +R P M N+ I NSR L N +R + +VP
Sbjct: 708 ECTVTIDGVIKQRRLPPQMENLAERIALNSRYYLKNNSRSEPLVP 752
>AF308448-1|AAL09434.1| 1311|Caenorhabditis elegans PXF isoform B
protein.
Length = 1311
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 224 KCKIPLISTSGNQRTKP-MNNIENTIVTNSRPRLTNRTRDQGMVP 355
+C + + +R P M N+ I NSR L N +R + +VP
Sbjct: 831 ECTVTIDGVIKQRRLPPQMENLAERIALNSRYYLKNNSRSEPLVP 875
>AF308447-1|AAL09433.1| 1470|Caenorhabditis elegans PXF isoform A
protein.
Length = 1470
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 224 KCKIPLISTSGNQRTKP-MNNIENTIVTNSRPRLTNRTRDQGMVP 355
+C + + +R P M N+ I NSR L N +R + +VP
Sbjct: 831 ECTVTIDGVIKQRRLPPQMENLAERIALNSRYYLKNNSRSEPLVP 875
>AF170796-1|AAF22963.1| 1470|Caenorhabditis elegans RA-GEF protein.
Length = 1470
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 224 KCKIPLISTSGNQRTKP-MNNIENTIVTNSRPRLTNRTRDQGMVP 355
+C + + +R P M N+ I NSR L N +R + +VP
Sbjct: 831 ECTVTIDGVIKQRRLPPQMENLAERIALNSRYYLKNNSRSEPLVP 875
>Z81473-6|CAB03895.2| 657|Caenorhabditis elegans Hypothetical
protein C17D12.7 protein.
Length = 657
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 290 NTIVTNSRPRLTNRTRDQGMVPGRTLHTIPMLRIRPEREK 409
+ +++NS R TN T G PG H+I +++ P ++K
Sbjct: 353 SNLISNSGNR-TNLTVFDGFAPGALRHSISTVQMSPTKKK 391
>U40958-5|AAA81764.1| 654|Caenorhabditis elegans Hypothetical
protein F09F9.4 protein.
Length = 654
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +2
Query: 137 AIISMIMSLIVSDEPKIEEIITAARQQTTKCKIPLISTSGNQRTKPMNNIENTIVTN 307
AI+++I I+ P + +TA+ ++ T ++PL+ + N E+T V++
Sbjct: 520 AIMAIIFICIIFIPPLVCAAVTASMRRNTSPEVPLMDNKYDSEMIRSGNTESTHVSS 576
>Z81533-11|CAE17829.1| 355|Caenorhabditis elegans Hypothetical
protein F36G9.16 protein.
Length = 355
Score = 26.6 bits (56), Expect = 8.8
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = -2
Query: 405 SRSGRILSMGIVCSV--LPGTMP*SLVRLVN-RGRELVTIVFSMLFIGFVL*FPDVDING 235
SRS M ++ +V L T P + VN G + + + F + IG F + ING
Sbjct: 264 SRSNGSTKMVVLITVTFLIATFPLGMTYFVNFLGLDDI-LAFFLYIIGIFCEFVSI-ING 321
Query: 234 ILHLVVC-CLAAVIISSI 184
LH V+C C++++ +++
Sbjct: 322 TLHFVLCACVSSLYQNTV 339
>Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical
protein K07F5.13c protein.
Length = 639
Score = 26.6 bits (56), Expect = 8.8
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 317 RLTNRTRDQGMVPGRTLHTIPMLRIRPEREKLLPALK 427
R++ RT D+G V H I L R+K+L +K
Sbjct: 319 RISERTDDEGFVTLVLRHPITNLNTEERRDKILEIIK 355
>Z70284-12|CAB54278.1| 549|Caenorhabditis elegans Hypothetical
protein K07F5.13b protein.
Length = 549
Score = 26.6 bits (56), Expect = 8.8
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 317 RLTNRTRDQGMVPGRTLHTIPMLRIRPEREKLLPALK 427
R++ RT D+G V H I L R+K+L +K
Sbjct: 229 RISERTDDEGFVTLVLRHPITNLNTEERRDKILEIIK 265
>Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical
protein K07F5.13a protein.
Length = 612
Score = 26.6 bits (56), Expect = 8.8
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 317 RLTNRTRDQGMVPGRTLHTIPMLRIRPEREKLLPALK 427
R++ RT D+G V H I L R+K+L +K
Sbjct: 292 RISERTDDEGFVTLVLRHPITNLNTEERRDKILEIIK 328
>U80024-8|AAK18887.3| 288|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 9 protein.
Length = 288
Score = 26.6 bits (56), Expect = 8.8
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = -2
Query: 390 ILSMGIVCSVLPGTMP*SLVRLVNRGRELVTIVFSMLFI 274
+ S+G++CSV M ++ + R R+ + + F LF+
Sbjct: 17 VTSIGVICSVFTIFMNIYFIKQIGRTRQKMILFFYRLFL 55
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,078,747
Number of Sequences: 27780
Number of extensions: 190301
Number of successful extensions: 452
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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