Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9f21
(485 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P04350 Cluster: Tubulin beta-4 chain; n=4602; root|Rep:... 92 5e-18
UniRef50_A2FXL6 Cluster: Tubulin beta chain, putative; n=1; Tric... 88 1e-16
UniRef50_P52275 Cluster: Tubulin beta-2 chain; n=115; Bilateria|... 82 6e-15
UniRef50_Q9VAX7 Cluster: CG4869-PA; n=8; Eukaryota|Rep: CG4869-P... 80 2e-14
UniRef50_UPI00005A581E Cluster: PREDICTED: similar to tubulin, b... 78 9e-14
UniRef50_UPI00005639CD Cluster: UPI00005639CD related cluster; n... 74 1e-12
UniRef50_Q227Z6 Cluster: Tubulin/FtsZ family, GTPase domain cont... 72 6e-12
UniRef50_UPI0000E4A877 Cluster: PREDICTED: similar to beta-tubul... 68 1e-10
UniRef50_A7NXT4 Cluster: Chromosome chr5 scaffold_2, whole genom... 67 2e-10
UniRef50_P78672 Cluster: Beta-tubulin; n=3; Hypocreales|Rep: Bet... 64 2e-09
UniRef50_Q402S5 Cluster: Beta-tubulin; n=6; Trichocomaceae|Rep: ... 62 9e-09
UniRef50_Q9VRX3 Cluster: Probable tubulin beta chain CG32396; n=... 55 1e-06
UniRef50_Q2U1M2 Cluster: Beta tubulin; n=649; root|Rep: Beta tub... 54 2e-06
UniRef50_Q24D61 Cluster: Tubulin/FtsZ family, GTPase domain cont... 47 3e-04
UniRef50_Q8J1W3 Cluster: Beta-tubulin; n=1; Colletotrichum sp.|R... 46 3e-04
UniRef50_A2EAH1 Cluster: Gamma tubulin, putative; n=5; Eukaryota... 43 0.003
UniRef50_Q8SRD2 Cluster: Tubulin gamma chain; n=1; Encephalitozo... 43 0.003
UniRef50_Q26236 Cluster: Beta-tubulin; n=5; Eukaryota|Rep: Beta-... 40 0.023
UniRef50_Q24D62 Cluster: Tubulin/FtsZ family, GTPase domain cont... 40 0.030
UniRef50_Q8K5B7 Cluster: Neuron-specific class III beta-tubulin;... 40 0.039
UniRef50_Q3ZJ98 Cluster: Tubulin gamma subunit; n=1; Monocercomo... 38 0.091
UniRef50_Q4S6A2 Cluster: Chromosome 9 SCAF14729, whole genome sh... 38 0.12
UniRef50_P34475 Cluster: Tubulin gamma chain; n=2; Caenorhabditi... 38 0.12
UniRef50_P23258 Cluster: Tubulin gamma-1 chain; n=213; cellular ... 38 0.12
UniRef50_Q7R2Q0 Cluster: GLP_546_6876_8351; n=1; Giardia lamblia... 38 0.16
UniRef50_Q4SEQ2 Cluster: Chromosome 3 SCAF14614, whole genome sh... 37 0.21
UniRef50_Q2XVP6 Cluster: Beta 5-tubulin; n=2; Eutheria|Rep: Beta... 37 0.21
UniRef50_Q8N532 Cluster: TUBA1C protein; n=9; Amniota|Rep: TUBA1... 37 0.21
UniRef50_P68363 Cluster: Tubulin alpha-1B chain; n=970; Eukaryot... 37 0.21
UniRef50_Q3HRW7 Cluster: Alpha-tubulin-like protein; n=3; Eukary... 37 0.28
UniRef50_A5HWB6 Cluster: Bacterial tubulin B; n=8; Prosthecobact... 36 0.49
UniRef50_Q5CPW5 Cluster: Putative uncharacterized protein; n=2; ... 36 0.49
UniRef50_Q22YZ9 Cluster: Tubulin/FtsZ family, GTPase domain cont... 36 0.49
UniRef50_A4HVG1 Cluster: Alpha tubulin; n=2; Leishmania|Rep: Alp... 36 0.49
UniRef50_A4H729 Cluster: Alpha tubulin; n=5; Trypanosomatidae|Re... 36 0.64
UniRef50_A6RFR4 Cluster: Tubulin gamma chain; n=1; Ajellomyces c... 35 0.85
UniRef50_Q4QC95 Cluster: Epsilon tubulin, putative; n=6; Trypano... 33 3.4
UniRef50_Q3SEG6 Cluster: Beta_tubulin,putative; n=1; Paramecium ... 33 3.4
UniRef50_UPI00005A03AE Cluster: PREDICTED: similar to tubulin, a... 33 4.5
UniRef50_Q7QZN1 Cluster: GLP_680_43068_44504; n=1; Giardia lambl... 33 4.5
UniRef50_UPI00006CA67A Cluster: Tubulin/FtsZ family, GTPase doma... 32 6.0
UniRef50_Q803I3 Cluster: Bridging integrator 2, like; n=5; Clupe... 32 7.9
UniRef50_Q7MY62 Cluster: Similarities with formyltransferase; n=... 32 7.9
UniRef50_A7C326 Cluster: Secreted protein; n=1; Beggiatoa sp. PS... 32 7.9
UniRef50_Q6AU00 Cluster: Alpha tubulin; n=1; Oryza sativa (japon... 32 7.9
UniRef50_Q56XQ6 Cluster: Nitrate transporter NTL1; n=11; Magnoli... 32 7.9
UniRef50_P09733 Cluster: Tubulin alpha-1 chain; n=493; Eukaryota... 32 7.9
>UniRef50_P04350 Cluster: Tubulin beta-4 chain; n=4602; root|Rep:
Tubulin beta-4 chain - Homo sapiens (Human)
Length = 444
Score = 92.3 bits (219), Expect = 5e-18
Identities = 41/48 (85%), Positives = 42/48 (87%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
+FWEVISDEHGIDP G Y GDSDLQLERINVYYNEA G YVPRAVLV
Sbjct: 19 KFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLV 66
Score = 38.7 bits (86), Expect = 0.069
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSK 187
MREIVH+Q G+CGNQIG+K
Sbjct: 1 MREIVHLQAGQCGNQIGAK 19
>UniRef50_A2FXL6 Cluster: Tubulin beta chain, putative; n=1;
Trichomonas vaginalis G3|Rep: Tubulin beta chain,
putative - Trichomonas vaginalis G3
Length = 168
Score = 87.8 bits (208), Expect = 1e-16
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
+FWEV+SDEHG+DP G+Y GDSDLQLE INVY+NEA +YVPRAVLV
Sbjct: 20 KFWEVVSDEHGVDPTGKYYGDSDLQLENINVYFNEAINTRYVPRAVLV 67
Score = 37.9 bits (84), Expect = 0.12
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSK 187
+REIVH+Q G+CGNQIG+K
Sbjct: 2 VREIVHIQAGQCGNQIGTK 20
>UniRef50_P52275 Cluster: Tubulin beta-2 chain; n=115;
Bilateria|Rep: Tubulin beta-2 chain - Caenorhabditis
elegans
Length = 450
Score = 82.2 bits (194), Expect = 6e-15
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
+FWEVISDEHGI P G ++G++DLQLERI+VYYNEA KYVPRAVLV
Sbjct: 19 KFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYVPRAVLV 66
Score = 41.1 bits (92), Expect = 0.013
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSK 187
MREIVHVQ G+CGNQIGSK
Sbjct: 1 MREIVHVQAGQCGNQIGSK 19
>UniRef50_Q9VAX7 Cluster: CG4869-PA; n=8; Eukaryota|Rep: CG4869-PA -
Drosophila melanogaster (Fruit fly)
Length = 522
Score = 80.2 bits (189), Expect = 2e-14
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
+FWE+ISDEHGIDP G Y G+S LQ ERI+VYYNEA KYVPRAVL+
Sbjct: 19 KFWEIISDEHGIDPNGYYHGESALQHERIDVYYNEASSGKYVPRAVLI 66
Score = 40.3 bits (90), Expect = 0.023
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSKVKKI 199
MREIVH+Q G+CGNQIGSK +I
Sbjct: 1 MREIVHLQAGQCGNQIGSKFWEI 23
>UniRef50_UPI00005A581E Cluster: PREDICTED: similar to tubulin, beta
3; n=2; Canis lupus familiaris|Rep: PREDICTED: similar
to tubulin, beta 3 - Canis familiaris
Length = 363
Score = 78.2 bits (184), Expect = 9e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
+FWEVISD+H IDP G Y GDSDLQLERI+VYY EA KY+PRA+ V
Sbjct: 19 KFWEVISDKHSIDPSGNYVGDSDLQLERISVYYKEASSHKYMPRAIRV 66
Score = 33.9 bits (74), Expect = 2.0
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSK 187
MREIVH+Q +CGNQI +K
Sbjct: 1 MREIVHIQASQCGNQIRAK 19
>UniRef50_UPI00005639CD Cluster: UPI00005639CD related cluster; n=1;
Mus musculus|Rep: UPI00005639CD UniRef100 entry - Mus
musculus
Length = 377
Score = 74.1 bits (174), Expect = 1e-12
Identities = 34/48 (70%), Positives = 36/48 (75%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
+FW VISD H I P G Y GDSDLQLERI+VYYNEA G YV RA LV
Sbjct: 19 KFWIVISDGHSIKPTGTYHGDSDLQLERISVYYNEATGGNYVSRAALV 66
>UniRef50_Q227Z6 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 436
Score = 72.1 bits (169), Expect = 6e-12
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = +2
Query: 344 FWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
+WE IS EHGI P G ++GDSDLQLE+I+VYYN+ KYVPRA+L+
Sbjct: 20 YWEEISKEHGIQPTGVHKGDSDLQLEKIDVYYNQTKADKYVPRAILI 66
>UniRef50_UPI0000E4A877 Cluster: PREDICTED: similar to beta-tubulin,
partial; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to beta-tubulin, partial -
Strongylocentrotus purpuratus
Length = 224
Score = 67.7 bits (158), Expect = 1e-10
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = +2
Query: 377 DPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
DP G YQGDSDLQLERINVYYNEA G +YVPRAVL+
Sbjct: 2 DPTGTYQGDSDLQLERINVYYNEAAGGQYVPRAVLL 37
>UniRef50_A7NXT4 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 100
Score = 66.9 bits (156), Expect = 2e-10
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRA 475
+ WEV+ EH ID GRYQGD +LQLE++NVYYNEA ++VPRA
Sbjct: 19 KLWEVVCIEHDIDSIGRYQGDMELQLEQVNVYYNEANCGRFVPRA 63
Score = 32.3 bits (70), Expect = 6.0
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSKVKKI*ILSYIFDN 226
MREI HVQ G+C NQI +K+ ++ + + D+
Sbjct: 1 MREIFHVQGGQCRNQIEAKLWEVVCIEHDIDS 32
>UniRef50_P78672 Cluster: Beta-tubulin; n=3; Hypocreales|Rep:
Beta-tubulin - Gibberella pulicaris
Length = 93
Score = 64.1 bits (149), Expect = 2e-09
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = +2
Query: 344 FWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVP 469
FW+ IS EHG+D G Y G S+LQLER++VY+NEA G KYVP
Sbjct: 16 FWQTISGEHGLDSNGVYSGTSELQLERMSVYFNEASGNKYVP 57
>UniRef50_Q402S5 Cluster: Beta-tubulin; n=6; Trichocomaceae|Rep:
Beta-tubulin - Thysanophora penicillioides
Length = 62
Score = 61.7 bits (143), Expect = 9e-09
Identities = 28/43 (65%), Positives = 33/43 (76%)
Frame = +2
Query: 356 ISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
I+ EHG+D G Y G SDLQLER+NVY+ A G +YVPRAVLV
Sbjct: 3 IAAEHGLDGDGHYNGTSDLQLERMNVYFTAASGDRYVPRAVLV 45
>UniRef50_Q9VRX3 Cluster: Probable tubulin beta chain CG32396; n=1;
Drosophila melanogaster|Rep: Probable tubulin beta chain
CG32396 - Drosophila melanogaster (Fruit fly)
Length = 462
Score = 54.8 bits (126), Expect = 1e-06
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +2
Query: 344 FWEVISDEHGID-PCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
FW VIS EHG+D GR+ G S LQLERINV++N ++ R +L+
Sbjct: 20 FWHVISHEHGVDYASGRFGGTSPLQLERINVFFNATASKRFYARTILI 67
>UniRef50_Q2U1M2 Cluster: Beta tubulin; n=649; root|Rep: Beta
tubulin - Aspergillus oryzae
Length = 817
Score = 54.0 bits (124), Expect = 2e-06
Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Frame = +2
Query: 344 FWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAF--GAKYVPRAVLV 484
FWE I+DEHG+D G++ G SD Q E+++VY++E YVPRA+L+
Sbjct: 412 FWEAITDEHGLDTSGKFTG-SDYQREKLDVYFSEVITEPQNYVPRAILL 459
>UniRef50_Q24D61 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 441
Score = 46.8 bits (106), Expect = 3e-04
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +2
Query: 338 LQFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
L FWE + EH +DP G SD Q E+ NVY+ E Y R++ V
Sbjct: 18 LDFWEALHIEHSLDPYGDLNHSSDYQKEKFNVYFLETIKGSYCARSIQV 66
>UniRef50_Q8J1W3 Cluster: Beta-tubulin; n=1; Colletotrichum sp.|Rep:
Beta-tubulin - Colletotrichum sp
Length = 80
Score = 46.4 bits (105), Expect = 3e-04
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2
Query: 356 ISDEHGIDPCGRYQGDSDLQLERINVYYNEA 448
IS EHG+D G Y G S+LQLER++VY+NEA
Sbjct: 3 ISGEHGLDSNGVYNGTSELQLERMSVYFNEA 33
>UniRef50_A2EAH1 Cluster: Gamma tubulin, putative; n=5;
Eukaryota|Rep: Gamma tubulin, putative - Trichomonas
vaginalis G3
Length = 457
Score = 43.2 bits (97), Expect = 0.003
Identities = 16/49 (32%), Positives = 31/49 (63%)
Frame = +2
Query: 338 LQFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
L+FW+ +S EHGI P G + + +R ++++ + +Y+PRA+L+
Sbjct: 19 LEFWKTLSTEHGIGPDGVLREPENTLEDRKDIFFYSSDDGRYIPRAILI 67
>UniRef50_Q8SRD2 Cluster: Tubulin gamma chain; n=1; Encephalitozoon
cuniculi|Rep: Tubulin gamma chain - Encephalitozoon
cuniculi
Length = 434
Score = 43.2 bits (97), Expect = 0.003
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
+FW+ + EHGI CG Q DL +R +V++ +A +VPRA+LV
Sbjct: 19 EFWKTLCKEHGISMCGVLQDSRDLG-DRKDVFFYQADDNVFVPRAILV 65
Score = 33.5 bits (73), Expect = 2.6
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSKVKK 196
MRE+V +QVG+CGNQ+G++ K
Sbjct: 1 MREVVTLQVGQCGNQMGAEFWK 22
>UniRef50_Q26236 Cluster: Beta-tubulin; n=5; Eukaryota|Rep:
Beta-tubulin - Reticulomyxa filosa
Length = 473
Score = 40.3 bits (90), Expect = 0.023
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Frame = +2
Query: 344 FWEVISDEHGIDPCGRY-----QGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
FWE + EH + G++ + ++L++I VY+ EA +YVPRA+LV
Sbjct: 21 FWETMCKEHHLAEDGKFVPSQNKHHDQIRLDKIGVYFREAGEKRYVPRAILV 72
Score = 37.9 bits (84), Expect = 0.12
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGS 184
+REIVHVQVG+CGNQIG+
Sbjct: 2 VREIVHVQVGQCGNQIGN 19
>UniRef50_Q24D62 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 459
Score = 39.9 bits (89), Expect = 0.030
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 344 FWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
FWE + EH +D G SD Q E+I VY++E +Y R++L+
Sbjct: 20 FWESLCTEHQLDQDGYSDKMSDFQREQIGVYFDEQNDKRYKARSLLI 66
>UniRef50_Q8K5B7 Cluster: Neuron-specific class III beta-tubulin;
n=6; Fungi/Metazoa group|Rep: Neuron-specific class III
beta-tubulin - Rattus norvegicus (Rat)
Length = 19
Score = 39.5 bits (88), Expect = 0.039
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSK 187
MREIVH+Q G+CGNQIG+K
Sbjct: 1 MREIVHIQAGQCGNQIGAK 19
>UniRef50_Q3ZJ98 Cluster: Tubulin gamma subunit; n=1;
Monocercomonoides sp. PA203|Rep: Tubulin gamma subunit -
Monocercomonoides sp. PA203
Length = 479
Score = 38.3 bits (85), Expect = 0.091
Identities = 17/48 (35%), Positives = 32/48 (66%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
+FW+ I+ EHGI+ G + ++ +R +V++ +A ++VPRAVL+
Sbjct: 19 EFWKNITTEHGIELDGVLKDEAAAVDDRKDVFFYQADDDRFVPRAVLI 66
>UniRef50_Q4S6A2 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=6; Euteleostomi|Rep: Chromosome 9
SCAF14729, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 416
Score = 37.9 bits (84), Expect = 0.12
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDL--QLERINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G+ D L + N +++E K+VPRAV V
Sbjct: 22 WELYCLEHGIQPDGQMPSDKTLGGGDDSFNTFFSETGAGKHVPRAVFV 69
>UniRef50_P34475 Cluster: Tubulin gamma chain; n=2;
Caenorhabditis|Rep: Tubulin gamma chain - Caenorhabditis
elegans
Length = 444
Score = 37.9 bits (84), Expect = 0.12
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 344 FWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
FW+ + DEHGI+ G+ + D+ ++ ++Y +A YVPRAVLV
Sbjct: 23 FWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAVLV 68
>UniRef50_P23258 Cluster: Tubulin gamma-1 chain; n=213; cellular
organisms|Rep: Tubulin gamma-1 chain - Homo sapiens
(Human)
Length = 451
Score = 37.9 bits (84), Expect = 0.12
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
+FW+ + EHGI P G + + +R +V++ +A Y+PRAVL+
Sbjct: 20 EFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPRAVLL 67
>UniRef50_Q7R2Q0 Cluster: GLP_546_6876_8351; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_546_6876_8351 - Giardia lamblia ATCC
50803
Length = 491
Score = 37.5 bits (83), Expect = 0.16
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +2
Query: 344 FWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
FW + EHGI+P G + ++ +R +V++ ++ YVPRA+L+
Sbjct: 40 FWNRLCTEHGINPDGTLRPEAYTFNDRKDVFFYQSDDEHYVPRAILL 86
>UniRef50_Q4SEQ2 Cluster: Chromosome 3 SCAF14614, whole genome
shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 3
SCAF14614, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 407
Score = 37.1 bits (82), Expect = 0.21
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G+ D + + N +++E K+VPRAV V
Sbjct: 26 WELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 73
>UniRef50_Q2XVP6 Cluster: Beta 5-tubulin; n=2; Eutheria|Rep: Beta
5-tubulin - Sus scrofa (Pig)
Length = 17
Score = 37.1 bits (82), Expect = 0.21
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIG 181
MREIVH+Q G+CGNQIG
Sbjct: 1 MREIVHIQAGQCGNQIG 17
>UniRef50_Q8N532 Cluster: TUBA1C protein; n=9; Amniota|Rep: TUBA1C
protein - Homo sapiens (Human)
Length = 325
Score = 37.1 bits (82), Expect = 0.21
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G+ D + + N +++E K+VPRAV V
Sbjct: 21 WELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 68
>UniRef50_P68363 Cluster: Tubulin alpha-1B chain; n=970;
Eukaryota|Rep: Tubulin alpha-1B chain - Homo sapiens
(Human)
Length = 451
Score = 37.1 bits (82), Expect = 0.21
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G+ D + + N +++E K+VPRAV V
Sbjct: 21 WELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 68
>UniRef50_Q3HRW7 Cluster: Alpha-tubulin-like protein; n=3;
Eukaryota|Rep: Alpha-tubulin-like protein - Solanum
tuberosum (Potato)
Length = 237
Score = 36.7 bits (81), Expect = 0.28
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G+ D + + N +++E K+VPRAV V
Sbjct: 21 WELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFV 68
>UniRef50_A5HWB6 Cluster: Bacterial tubulin B; n=8;
Prosthecobacter|Rep: Bacterial tubulin B -
Prosthecobacter vanneervenii
Length = 442
Score = 35.9 bits (79), Expect = 0.49
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGR-YQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
+FW ++ EHG+ G +G + + V++++ KY+PRA+LV
Sbjct: 37 RFWRLVLREHGLTEAGTPKEGTNVAANANMEVFFHKVRDGKYIPRAILV 85
>UniRef50_Q5CPW5 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 238
Score = 35.9 bits (79), Expect = 0.49
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +1
Query: 10 HFSFKHM*TFYFCVFCIFVLF*YLVLPQLFSINSLLLIHENERNSSRTGR 159
H +F H+ TF+F +F IF+L + L F +LL I E ER+ S T +
Sbjct: 152 HIAFIHVVTFFFMLFLIFIL---IGLLSSFVAENLLYILEEERDESSTAQ 198
>UniRef50_Q22YZ9 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 498
Score = 35.9 bits (79), Expect = 0.49
Identities = 13/19 (68%), Positives = 18/19 (94%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSK 187
MRE++ +QVG+CGNQIG+K
Sbjct: 1 MRELITIQVGQCGNQIGAK 19
>UniRef50_A4HVG1 Cluster: Alpha tubulin; n=2; Leishmania|Rep: Alpha
tubulin - Leishmania infantum
Length = 327
Score = 35.9 bits (79), Expect = 0.49
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDLQLE--RINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G D + +E N +++E K+VPR + +
Sbjct: 113 WELFCLEHGIQPDGSMPSDKCIGVEDDAFNTFFSETGAGKHVPRCIFL 160
>UniRef50_A4H729 Cluster: Alpha tubulin; n=5; Trypanosomatidae|Rep:
Alpha tubulin - Leishmania braziliensis
Length = 267
Score = 35.5 bits (78), Expect = 0.64
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDLQLE--RINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G D + +E N +++E K+VPR++ +
Sbjct: 55 WELFCLEHGIQPDGSMPSDKCIGVEDDAFNTFFSETGAGKHVPRSLFL 102
>UniRef50_A6RFR4 Cluster: Tubulin gamma chain; n=1; Ajellomyces
capsulatus NAm1|Rep: Tubulin gamma chain - Ajellomyces
capsulatus NAm1
Length = 655
Score = 35.1 bits (77), Expect = 0.85
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
QFW+ + EHGI+ G + +R +V++ ++ +Y+PRA+L+
Sbjct: 257 QFWQQLCLEHGINKDGNLAEFATEGGDRKDVFFYQSDDTRYIPRAILL 304
>UniRef50_Q4QC95 Cluster: Epsilon tubulin, putative; n=6;
Trypanosomatidae|Rep: Epsilon tubulin, putative -
Leishmania major
Length = 470
Score = 33.1 bits (72), Expect = 3.4
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +2
Query: 134 REIVHVQVGRCGNQIGSK 187
REIV VQVG+CGNQ+G +
Sbjct: 3 REIVTVQVGQCGNQLGQR 20
>UniRef50_Q3SEG6 Cluster: Beta_tubulin,putative; n=1; Paramecium
tetraurelia|Rep: Beta_tubulin,putative - Paramecium
tetraurelia
Length = 435
Score = 33.1 bits (72), Expect = 3.4
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSKVKKI*ILSY-IFDNSTLAQP 244
MREI+H+ +G CG +IG K + I Y I +N T +P
Sbjct: 1 MREIIHIGLGNCGVRIGCKFYEQLIQDYQIENNRTCEKP 39
>UniRef50_UPI00005A03AE Cluster: PREDICTED: similar to tubulin,
alpha 1; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to tubulin, alpha 1 - Canis familiaris
Length = 300
Score = 32.7 bits (71), Expect = 4.5
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P + D + N ++E K+VPRAV V
Sbjct: 65 WELYCREHGIQPDAQMPSDKTTGGGDDSFNTLFSETGAGKHVPRAVFV 112
>UniRef50_Q7QZN1 Cluster: GLP_680_43068_44504; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_680_43068_44504 - Giardia lamblia
ATCC 50803
Length = 478
Score = 32.7 bits (71), Expect = 4.5
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSK 187
MREI+ VQ G+CGNQIG++
Sbjct: 1 MREILVVQTGQCGNQIGAE 19
>UniRef50_UPI00006CA67A Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 452
Score = 32.3 bits (70), Expect = 6.0
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
++W+ I EH I+ G+ E + +++E+ KYVPR V +
Sbjct: 19 EYWKQICLEHNINSYGQKLTQQQDDNENVTCFFSESEKQKYVPRCVFL 66
>UniRef50_Q803I3 Cluster: Bridging integrator 2, like; n=5;
Clupeocephala|Rep: Bridging integrator 2, like - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 524
Score = 31.9 bits (69), Expect = 7.9
Identities = 11/36 (30%), Positives = 27/36 (75%)
Frame = +1
Query: 106 NSLLLIHENERNSSRTGREMWEPDWLEGKKNMNIIV 213
N++ ++HE+ + S+T ++++EPDW G +++ +I+
Sbjct: 77 NAVKVMHESSKRLSQTLKDIYEPDW-HGVEDLTVIM 111
>UniRef50_Q7MY62 Cluster: Similarities with formyltransferase; n=1;
Photorhabdus luminescens subsp. laumondii|Rep:
Similarities with formyltransferase - Photorhabdus
luminescens subsp. laumondii
Length = 390
Score = 31.9 bits (69), Expect = 7.9
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 166 TSPDLYVNYFSHSRVLITKNLSKII 92
TS D+Y+NY SHS LI + KII
Sbjct: 145 TSKDIYLNYISHSCTLIEDYIEKII 169
>UniRef50_A7C326 Cluster: Secreted protein; n=1; Beggiatoa sp.
PS|Rep: Secreted protein - Beggiatoa sp. PS
Length = 235
Score = 31.9 bits (69), Expect = 7.9
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 329 IKLLQFWEVISDEHGIDPCGRYQGDSDLQLERIN--VYYNEA 448
IKL+Q+W HG G YQG +Q + +N YN+A
Sbjct: 29 IKLVQWWGEYLPHHGKKHSGHYQGKRSIQYQDVNGDDIYNDA 70
>UniRef50_Q6AU00 Cluster: Alpha tubulin; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Alpha tubulin - Oryza sativa subsp.
japonica (Rice)
Length = 195
Score = 31.9 bits (69), Expect = 7.9
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDLQL--ERINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI G+ D + + N +++E K+VPRAV +
Sbjct: 21 WELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGKHVPRAVFL 68
>UniRef50_Q56XQ6 Cluster: Nitrate transporter NTL1; n=11;
Magnoliophyta|Rep: Nitrate transporter NTL1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 601
Score = 31.9 bits (69), Expect = 7.9
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = -2
Query: 397 LVAATGVDSVLVRYHFPKLEQFYVNKKKTTISCLKV-GYVIHVIFNRQCLRYRLSKG*IV 221
++ +G + V+ H P+L N K TTI C++ GY ++ CL L G +
Sbjct: 118 VIEISGFILLSVQAHLPELRPPECNMKSTTIHCVEANGYKAATLYTALCL-VALGSGCLK 176
Query: 220 KNVR*YSYFFYLRANLVPTSPDLYVNYFSHS 128
N+ + + R +L S YF+ S
Sbjct: 177 PNIISHGANQFQRKDLRKLSSFFNAAYFAFS 207
>UniRef50_P09733 Cluster: Tubulin alpha-1 chain; n=493;
Eukaryota|Rep: Tubulin alpha-1 chain - Saccharomyces
cerevisiae (Baker's yeast)
Length = 447
Score = 31.9 bits (69), Expect = 7.9
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQ-GDSDLQ--LERINVYYNEAFGAKYVPRAVLV 484
WE+ S EHGI P G + G S + E + +++E K+VPRA+ V
Sbjct: 21 WELYSLEHGIKPDGHLEDGLSKPKGGEEGFSTFFHETGYGKFVPRAIYV 69
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,045,245
Number of Sequences: 1657284
Number of extensions: 8184971
Number of successful extensions: 20371
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 19806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20353
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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