Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9f21
(485 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 92 2e-19
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 91 5e-19
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 91 5e-19
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 89 1e-18
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 83 8e-17
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 82 2e-16
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 67 7e-12
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 67 7e-12
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 39 0.002
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 38 0.003
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 38 0.003
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 38 0.004
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 38 0.004
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 37 0.009
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 37 0.009
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 37 0.009
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 37 0.009
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 37 0.009
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 36 0.012
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 36 0.012
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 34 0.063
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 34 0.063
U51995-4|AAA96072.2| 317|Caenorhabditis elegans F-box a protein... 27 5.5
Z81544-9|CAI79252.1| 231|Caenorhabditis elegans Hypothetical pr... 27 7.2
AF038608-2|AAU05595.1| 297|Caenorhabditis elegans Serpentine re... 27 7.2
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 92.3 bits (219), Expect = 2e-19
Identities = 41/48 (85%), Positives = 42/48 (87%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
+FWEVISDEHGIDP G Y GDSDLQLERINVYYNEA G KYVPRA LV
Sbjct: 19 KFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYVPRACLV 66
Score = 39.5 bits (88), Expect = 0.001
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSK 187
MREIVH+Q G+CGNQIG+K
Sbjct: 1 MREIVHIQAGQCGNQIGAK 19
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 90.6 bits (215), Expect = 5e-19
Identities = 41/48 (85%), Positives = 43/48 (89%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
+FWEVISDEHGIDP G+Y GDSDLQLERINVYYNEA KYVPRAVLV
Sbjct: 19 KFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLV 66
Score = 40.7 bits (91), Expect = 5e-04
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSK 187
MREIVH+Q G+CGNQIGSK
Sbjct: 1 MREIVHIQAGQCGNQIGSK 19
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 90.6 bits (215), Expect = 5e-19
Identities = 41/48 (85%), Positives = 43/48 (89%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
+FWEVISDEHGIDP G+Y GDSDLQLERINVYYNEA KYVPRAVLV
Sbjct: 19 KFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLV 66
Score = 40.7 bits (91), Expect = 5e-04
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSK 187
MREIVH+Q G+CGNQIGSK
Sbjct: 1 MREIVHIQAGQCGNQIGSK 19
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 89.4 bits (212), Expect = 1e-18
Identities = 40/48 (83%), Positives = 43/48 (89%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
+FWEVISDEHGI P G Y+G+SDLQLERINVYYNEA G KYVPRAVLV
Sbjct: 19 KFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYVPRAVLV 66
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSK 187
MREIVHVQ G+CGNQIG+K
Sbjct: 1 MREIVHVQAGQCGNQIGAK 19
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 83.4 bits (197), Expect = 8e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
+FWEVISDEHGI P G ++G+SDLQLERI+VYYNEA KYVPRAVLV
Sbjct: 19 KFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYVPRAVLV 66
Score = 41.1 bits (92), Expect = 4e-04
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSK 187
MREIVHVQ G+CGNQIGSK
Sbjct: 1 MREIVHVQAGQCGNQIGSK 19
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 82.2 bits (194), Expect = 2e-16
Identities = 36/48 (75%), Positives = 42/48 (87%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
+FWEVISDEHGI P G ++G++DLQLERI+VYYNEA KYVPRAVLV
Sbjct: 19 KFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYVPRAVLV 66
Score = 41.1 bits (92), Expect = 4e-04
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSK 187
MREIVHVQ G+CGNQIGSK
Sbjct: 1 MREIVHVQAGQCGNQIGSK 19
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 66.9 bits (156), Expect = 7e-12
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
+FWE IS+EHG+ G Y+GD+ QLERI YY E G KYVPRA+LV
Sbjct: 19 KFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILV 66
Score = 37.1 bits (82), Expect = 0.007
Identities = 14/19 (73%), Positives = 19/19 (100%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSK 187
M+EI++VQVG+CGNQIG+K
Sbjct: 1 MKEIINVQVGQCGNQIGAK 19
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 66.9 bits (156), Expect = 7e-12
Identities = 29/48 (60%), Positives = 35/48 (72%)
Frame = +2
Query: 341 QFWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
+FWE IS+EHG+ G Y+GD+ QLERI YY E G KYVPRA+LV
Sbjct: 19 KFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILV 66
Score = 37.1 bits (82), Expect = 0.007
Identities = 14/19 (73%), Positives = 19/19 (100%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSK 187
M+EI++VQVG+CGNQIG+K
Sbjct: 1 MKEIINVQVGQCGNQIGAK 19
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 41.5 bits (93), Expect = 3e-04
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDS--DLQLERINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G + D D + E IN ++ E G K+VPR + V
Sbjct: 27 WELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFV 74
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDLQLE--RINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G + L ++ N +++E K+VPRA++V
Sbjct: 26 WELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKHVPRAIMV 73
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G D E ++++ +YVPR++ V
Sbjct: 21 WELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFV 66
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G D E ++++ +YVPR++ V
Sbjct: 21 WELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFV 66
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 344 FWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
FW+ + DEHGI+ G+ + D+ ++ ++Y +A YVPRAVLV
Sbjct: 23 FWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAVLV 68
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +2
Query: 344 FWEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
FW+ + DEHGI+ G+ + D+ ++ ++Y +A YVPRAVLV
Sbjct: 23 FWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAVLV 68
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 36.7 bits (81), Expect = 0.009
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDLQLE--RINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G D+ +E N +++E K+VPRA+ V
Sbjct: 21 WELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGKHVPRAIFV 68
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDL--QLERINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G+ D L + + +++E ++VPRAV+V
Sbjct: 21 WELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMV 68
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDL--QLERINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G+ D L + + +++E ++VPRAV+V
Sbjct: 20 WELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMV 67
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDL--QLERINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G+ D L + + +++E ++VPRAV+V
Sbjct: 21 WELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMV 68
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDL--QLERINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G+ D L + + +++E ++VPRAV+V
Sbjct: 21 WELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMV 68
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G S + E ++++ +YVPR++ V
Sbjct: 21 WELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYVPRSIFV 66
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G S + E ++++ +YVPR++ V
Sbjct: 21 WELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYVPRSIFV 66
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 35.5 bits (78), Expect = 0.021
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRY-QGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
WE+ EHG+D G + + + + + + +++E+ K+VPRA+ V
Sbjct: 25 WELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHVPRAIYV 71
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.063
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G + + ++++ +YVPR++ V
Sbjct: 21 WELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYVPRSIFV 66
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.063
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 347 WEVISDEHGIDPCGRYQGDSDLQLERINVYYNEAFGAKYVPRAVLV 484
WE+ EHGI P G + + ++++ +YVPR++ V
Sbjct: 21 WELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYVPRSIFV 66
>U51995-4|AAA96072.2| 317|Caenorhabditis elegans F-box a protein
protein 53 protein.
Length = 317
Score = 27.5 bits (58), Expect = 5.5
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = -2
Query: 466 NIFSSKCFVVVDIDPLELQIRVSLVAATGVDSVLVRYHFPKLEQFYVNKKKTTISCLKV 290
++F KCF + D+D + QI + + D++L R F E + K I KV
Sbjct: 220 HMFHFKCFRIHDMDEVPAQIAIQM-----RDNLLRRSTFQSCEIIFAKSKSNPIELAKV 273
>Z81544-9|CAI79252.1| 231|Caenorhabditis elegans Hypothetical
protein F49C5.10 protein.
Length = 231
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -3
Query: 288 VTLFMLYSIDNAYGTG*ARV-ELSKMYDNIHIFFTFEPIWFPHL 160
+T +L SI G G V + S M + ++F F IW P L
Sbjct: 6 ITFILLLSIPFTNGNGCQVVNKASTMIGKLQLYFNFNKIWNPPL 49
>AF038608-2|AAU05595.1| 297|Caenorhabditis elegans Serpentine
receptor, class z protein70 protein.
Length = 297
Score = 27.1 bits (57), Expect = 7.2
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -2
Query: 352 FPKLEQFYVNKKKTTISCLKVGYVIHVI 269
FPKLE ++ + + + + + Y++HVI
Sbjct: 122 FPKLEPYFTSARNSLLDKIWALYIVHVI 149
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 131 MREIVHVQVGRCGNQIGSKVKKI*ILSY-IFDNSTLAQP 244
MRE++ + VG+ G QIG+ ++ L + I + T +P
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDGTSMEP 39
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,153,609
Number of Sequences: 27780
Number of extensions: 207035
Number of successful extensions: 597
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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