Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9f19
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    24   0.92 
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    24   1.2  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   3.7  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.6  

>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 513 CYNCNNEVTASTAKKLHECIE 575
           C  CN +V A+  K LH  I+
Sbjct: 70  CAKCNEKVKANVRKVLHHLID 90


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 321 ECKKVAKTEVLDPDFEEDLSLWMCLRCGT 407
           E  KV +  +LD D+  +  +WM L C +
Sbjct: 389 EGMKVFEELLLDADWSVNAGMWMWLSCSS 417


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/38 (23%), Positives = 22/38 (57%)
 Frame = +1

Query: 328 KKLQKLRYLIQILKKICPCGCVYVVARNSVAEHAINML 441
           KKL+++R + ++  ++   GC   +  + V +H I ++
Sbjct: 24  KKLEQMRQVHEVDNQLKQMGCDLDIPNSVVQKHLILLM 61


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +3

Query: 261 VDLTRLKKAIKIGGFEKECSECKKVAKTEVLDPDFEE 371
           +D   L++ ++  G   E      V +    DPDF E
Sbjct: 1   MDENHLEQTLENAGMPDESINISDVIEVIETDPDFHE 37


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +3

Query: 369 EDLSLWMCLRCGTQLC 416
           ++ ++ +C+RC  QLC
Sbjct: 228 DEQTIDICMRCHDQLC 243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,516
Number of Sequences: 336
Number of extensions: 2797
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)