Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9f19
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            28   0.22 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.7  
AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.    24   3.5  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   4.6  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   4.6  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   8.1  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 28.3 bits (60), Expect = 0.22
 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +1

Query: 286  LLKSEDLKKNVQSAKKLQKLRYLIQILKKICPCGCV-YVVARNSVAEHAI 432
            ++   D  K+++   K + L+++ QI +K+     + Y V+RN V +HAI
Sbjct: 2888 VINKMDKIKDMKMVLKEKNLKFITQIKEKVGKMKQIGYHVSRNDVTQHAI 2937


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +3

Query: 123  CKRERLRTQDTMVKKKRQSD 182
            C  +R RTQ +++++ RQ+D
Sbjct: 1414 CDLQRQRTQQSIIERSRQND 1433


>AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.
          Length = 167

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 516 YNCNNEVTASTAKKLHECIE 575
           YNC N V      K+ ECI+
Sbjct: 137 YNCKNAVPIVYQSKIDECIQ 156


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 321 ECKKVAKTEVLDPDFEEDLSLWMCLRCGT 407
           E  KV +  +LD D+  +  +WM L C +
Sbjct: 376 EGMKVFEELLLDADWSVNAGMWMWLSCSS 404


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 438  ALNHFNTPHSDCHALAANSTTWEIYCYNCNNEVT 539
            A N +        AL ++S   + Y YNCN + T
Sbjct: 1489 AANIYEPARGSVSALLSSSGLMKRYLYNCNGKRT 1522


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 493 PPPGKSTVTTVIMKLLH 543
           PPP K T+   + +LLH
Sbjct: 331 PPPAKETIHFALPELLH 347


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,054
Number of Sequences: 2352
Number of extensions: 11131
Number of successful extensions: 95
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)