Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9f19
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132902-8|CAC14423.2|  699|Caenorhabditis elegans Hypothetical ...    58   7e-09
U61954-2|ABS19469.1|  957|Caenorhabditis elegans Hypothetical pr...    41   9e-04
U61954-1|AAK29810.1|  955|Caenorhabditis elegans Hypothetical pr...    41   9e-04
U23484-5|AAK93844.1|  590|Caenorhabditis elegans Hypothetical pr...    36   0.024
AF040640-1|AAD34652.1|  602|Caenorhabditis elegans Hypothetical ...    34   0.098
Z68220-7|CAI79220.1|  260|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z75547-2|CAA99909.2|  622|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z75547-1|CAA99908.2|  621|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z49068-8|CAA88861.1|  540|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U25697-1|AAA92842.1|  540|Caenorhabditis elegans CCT-4 protein.        28   6.4  
AC084159-2|AAK39359.1|  659|Caenorhabditis elegans Hypothetical ...    28   6.4  

>AL132902-8|CAC14423.2|  699|Caenorhabditis elegans Hypothetical
           protein Y71A12B.9 protein.
          Length = 699

 Score = 57.6 bits (133), Expect = 7e-09
 Identities = 26/69 (37%), Positives = 40/69 (57%)
 Frame = +3

Query: 387 MCLRCGTQLCGRTRNKHALNHFNTPHSDCHALAANSTTWEIYCYNCNNEVTASTAKKLHE 566
           MCL CG  LCGR  + HAL+HF       H +  +  ++E+YCY+C++EV+      L+ 
Sbjct: 64  MCLTCGRILCGRNDSGHALHHF---EETSHPVVIDCISFELYCYSCDDEVSLDFEPSLYG 120

Query: 567 CIEYLKKQF 593
            ++ LK  F
Sbjct: 121 VLKSLKLLF 129


>U61954-2|ABS19469.1|  957|Caenorhabditis elegans Hypothetical protein
            F41H10.6c protein.
          Length = 957

 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +3

Query: 381  LWMCLRCGTQLCGRTRNKHALNHFNTPHSDCHALAANSTTWEIYCYNCNNEV 536
            +W CL C    CGR  N+HA+ H     S  H +A +     ++CY C++ V
Sbjct: 886  VWTCLTCYKYNCGRFVNEHAMMHH---LSSSHPMALSMADLSVWCYPCDSYV 934


>U61954-1|AAK29810.1|  955|Caenorhabditis elegans Hypothetical protein
            F41H10.6b protein.
          Length = 955

 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +3

Query: 381  LWMCLRCGTQLCGRTRNKHALNHFNTPHSDCHALAANSTTWEIYCYNCNNEV 536
            +W CL C    CGR  N+HA+ H     S  H +A +     ++CY C++ V
Sbjct: 884  VWTCLTCYKYNCGRFVNEHAMMHH---LSSSHPMALSMADLSVWCYPCDSYV 932


>U23484-5|AAK93844.1|  590|Caenorhabditis elegans Hypothetical
           protein EEED8.16 protein.
          Length = 590

 Score = 35.9 bits (79), Expect = 0.024
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
 Frame = +3

Query: 306 EKECSECKKVAKTEVLDPDFEEDLS----LWMCLRCGTQLCGRTRNKHALNHFN-TPHS 467
           +  C  C+ V   EV+      D      LW+CL CG   CGR   +HA  H+  T H+
Sbjct: 290 DNTCPVCRYVQSPEVVAEQRCNDCGMSNDLWICLICGNIGCGRYAEQHAQRHWELTSHT 348


>AF040640-1|AAD34652.1|  602|Caenorhabditis elegans Hypothetical
           protein F09D1.1 protein.
          Length = 602

 Score = 33.9 bits (74), Expect = 0.098
 Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
 Frame = +3

Query: 348 VLDPDFEEDLSL-------WMCLRCGTQLCGRTRNKHALNHFNTPHSDCHALAANSTTWE 506
           VLD DFE+  S+       + C+ CG    GR  N HA  H     +D H +  N  T +
Sbjct: 146 VLDFDFEKQCSVSLSHQNVYACMVCGKYFQGRGTNTHAYTH--ALETD-HHVFLNLQTLK 202

Query: 507 IYCYNCNNEV 536
            YC   N EV
Sbjct: 203 FYCLPDNYEV 212


>Z68220-7|CAI79220.1|  260|Caenorhabditis elegans Hypothetical
           protein T20D3.3b protein.
          Length = 260

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 2/118 (1%)
 Frame = +3

Query: 84  KPFYCNIYYYFNICKRERLRTQDTMVKKKRQSDPGENGDESTESCEENVKSACPHVAKAV 263
           KP +   Y+Y N  K  +  T  T +   R +D   NGD     C EN+ S  P  + ++
Sbjct: 28  KPNFHEKYWYRNALKENQTATAITEIDLFRVADCYHNGD---FECAENLSS--PETSISL 82

Query: 264 DLTRLKKAIKIG-GFEKECSECKKVAKTEV-LDPDFEEDLSLWMCLRCGTQLCGRTRN 431
                 ++I +  G + +    K    +++    +++++    M L C  QLCG   N
Sbjct: 83  QFLSYYESILVDFGDQIQFLRTKAFLLSKLPFTSNYQKEFKNTMALLC--QLCGSFEN 138


>Z75547-2|CAA99909.2|  622|Caenorhabditis elegans Hypothetical
           protein R11D1.1b protein.
          Length = 622

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 23/85 (27%), Positives = 42/85 (49%)
 Frame = +3

Query: 114 FNICKRERLRTQDTMVKKKRQSDPGENGDESTESCEENVKSACPHVAKAVDLTRLKKAIK 293
           FN+ +R R  + D    +    D GENGDE+ ++  +N++S+  + + + D + +   + 
Sbjct: 543 FNMRRRFREESSD----EDDSGDDGENGDEN-DNENDNIESSSSN-SDSSDASEVGDLMD 596

Query: 294 IGGFEKECSECKKVAKTEVLDPDFE 368
             G ++E  E    A  E  D D E
Sbjct: 597 FDGDDEEEDEGDDEAAIEEQDSDSE 621


>Z75547-1|CAA99908.2|  621|Caenorhabditis elegans Hypothetical
           protein R11D1.1a protein.
          Length = 621

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 23/85 (27%), Positives = 42/85 (49%)
 Frame = +3

Query: 114 FNICKRERLRTQDTMVKKKRQSDPGENGDESTESCEENVKSACPHVAKAVDLTRLKKAIK 293
           FN+ +R R  + D    +    D GENGDE+ ++  +N++S+  + + + D + +   + 
Sbjct: 542 FNMRRRFREESSD----EDDSGDDGENGDEN-DNENDNIESSSSN-SDSSDASEVGDLMD 595

Query: 294 IGGFEKECSECKKVAKTEVLDPDFE 368
             G ++E  E    A  E  D D E
Sbjct: 596 FDGDDEEEDEGDDEAAIEEQDSDSE 620


>Z49068-8|CAA88861.1|  540|Caenorhabditis elegans Hypothetical
           protein K01C8.10 protein.
          Length = 540

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +1

Query: 337 QKLRYLIQILKKICPCGCVYVVARNSVAEHAINML 441
           ++ +YL++I K+I   GC  ++ + S+   A+N L
Sbjct: 278 EERQYLLEICKQIKAAGCNVLLIQKSILRDAVNEL 312


>U25697-1|AAA92842.1|  540|Caenorhabditis elegans CCT-4 protein.
          Length = 540

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +1

Query: 337 QKLRYLIQILKKICPCGCVYVVARNSVAEHAINML 441
           ++ +YL++I K+I   GC  ++ + S+   A+N L
Sbjct: 278 EERQYLLEICKQIKAAGCNVLLIQKSILRDAVNEL 312


>AC084159-2|AAK39359.1|  659|Caenorhabditis elegans Hypothetical
           protein Y73B3A.1 protein.
          Length = 659

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
 Frame = +3

Query: 162 KKKRQSDPGENGDESTESCEENV--KSACPHVAKAVDLTR---LKKAIKIGGFEKECSE 323
           +K  +S P    +++ E  EE V  K   P    A    +   LKK  ++ G E+E SE
Sbjct: 440 RKPNESGPAPKSEKAVEKAEEKVEKKPKSPQKPPAKPTAQKPPLKKTEEVDGIEREASE 498


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,513,710
Number of Sequences: 27780
Number of extensions: 261617
Number of successful extensions: 937
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)