Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9f18
         (547 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   4.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.0  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   7.0  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    21   9.3  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    21   9.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.3  

>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 300 EPTPEALQRKLYFLLEQLQDMARELPPKY 386
           E   E  ++ ++FL    Q M +EL  KY
Sbjct: 75  EKQKEMTKKVIHFLSHNKQQMWKELTAKY 103


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 536 MLINNLQSLLE*MFLCDMLN 477
           + INN+Q   E  +LC+ +N
Sbjct: 760 LTINNIQKTNEGYYLCEAVN 779



 Score = 21.4 bits (43), Expect = 5.3
 Identities = 10/43 (23%), Positives = 20/43 (46%)
 Frame = -1

Query: 376 GSSLAISCNCSNKKYNFLCKASGVGSCNSIFEDNIKKQLLYLI 248
           G++  + CN  +   +F+   + VGS  S++         YL+
Sbjct: 137 GNTAVLKCNIPSFVADFVRVEAWVGSDGSLYNHTANYDSKYLV 179


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/36 (22%), Positives = 19/36 (52%)
 Frame = +3

Query: 252 KYNNCFFILSSNMELQEPTPEALQRKLYFLLEQLQD 359
           ++N C      +M + + TPE ++ +L+ ++    D
Sbjct: 574 QFNFCGCGWPQHMLIPKGTPEGMKSQLFVMISNYDD 609


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 434 TE*HNFRNSQRPNGDS 481
           TE    + S+RPNGD+
Sbjct: 72  TEGKRSKRSKRPNGDT 87


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 298 CNSIFEDNIKKQLLYLIK 245
           CN   ++ I+K + YL+K
Sbjct: 73  CNDKHKEGIRKVIHYLVK 90


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 5/10 (50%), Positives = 6/10 (60%)
 Frame = -1

Query: 511 CWNKCFSVTC 482
           CW +C   TC
Sbjct: 885 CWRECDKATC 894


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,289
Number of Sequences: 336
Number of extensions: 2411
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)