Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9f18
(547 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 1.5
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 2.0
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 23 2.0
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 23 2.0
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 2.7
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 2.7
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 2.7
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 2.7
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 2.7
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 2.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 2.7
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 3.5
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 3.5
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 6.2
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 21 6.2
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.4 bits (48), Expect = 1.5
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1
Query: 373 SSLAISCNCSNKKYN 329
SSL+ SCN SN YN
Sbjct: 305 SSLSNSCNYSNNYYN 319
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.0 bits (47), Expect = 2.0
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 289 WNYKSLPRKLYKENYI 336
+NY + +KLY +NYI
Sbjct: 331 YNYNNYNKKLYYKNYI 346
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 23.0 bits (47), Expect = 2.0
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 408 LLSGLANCLLNDTI--FEIVKGLMEIQHVTEKHLFQQR 515
L G+A + T+ E VK L+++QH++++ +QR
Sbjct: 15 LAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQR 52
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 23.0 bits (47), Expect = 2.0
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 408 LLSGLANCLLNDTI--FEIVKGLMEIQHVTEKHLFQQR 515
L G+A + T+ E VK L+++QH++++ +QR
Sbjct: 15 LAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQR 52
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 443 HNFRNSQRPNGDSTCHRE 496
H RNS R +G+ +C R+
Sbjct: 239 HEDRNSYRNDGERSCSRD 256
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 443 HNFRNSQRPNGDSTCHRE 496
H RNS R +G+ +C R+
Sbjct: 239 HEDRNSYRNDGERSCSRD 256
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 443 HNFRNSQRPNGDSTCHRE 496
H RNS R +G+ +C R+
Sbjct: 239 HEDRNSYRNDGERSCSRD 256
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 443 HNFRNSQRPNGDSTCHRE 496
H RNS R +G+ +C R+
Sbjct: 239 HEDRNSYRNDGERSCSRD 256
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 443 HNFRNSQRPNGDSTCHRE 496
H RNS R +G+ +C R+
Sbjct: 239 HEDRNSYRNDGERSCSRD 256
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.6 bits (46), Expect = 2.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 443 HNFRNSQRPNGDSTCHRE 496
H RNS R +G+ +C R+
Sbjct: 239 HEDRNSYRNDGERSCSRD 256
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.6 bits (46), Expect = 2.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +2
Query: 443 HNFRNSQRPNGDSTCHRE 496
H RNS R +G+ +C R+
Sbjct: 239 HEDRNSYRNDGERSCSRD 256
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.2 bits (45), Expect = 3.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 292 NYKSLPRKLYKENYI 336
NY + +KLY +NYI
Sbjct: 96 NYNNYNKKLYYKNYI 110
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.2 bits (45), Expect = 3.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1
Query: 292 NYKSLPRKLYKENYI 336
NY + +KLY +NYI
Sbjct: 337 NYNNYNKKLYYKNYI 351
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 6.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 530 INNLQSLLE*MFLCDMLN 477
INN+Q E +LC+ +N
Sbjct: 742 INNIQKTNEGYYLCEAVN 759
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 21.4 bits (43), Expect = 6.2
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -1
Query: 235 DRQFEHYLLIVEAIQCIQ*EIITH 164
+RQ E+ +I E + C + ++TH
Sbjct: 31 ERQEEYRCVICERVYCSRNSLMTH 54
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,763
Number of Sequences: 438
Number of extensions: 3006
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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