Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9f15
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.2  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   3.8  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   3.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   3.8  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   3.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.7  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   8.7  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 203 GKKDTTVTWWPFSANLL 153
           GKK     WWP + N L
Sbjct: 43  GKKVFKFAWWPLTRNAL 59


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 203 GKKDTTVTWWPFSANLL 153
           GKK     WWP + N L
Sbjct: 43  GKKVFKFAWWPLTRNAL 59


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 406 SQLIWNTHPRPYKIAAA 356
           SQ++   +P+PYK+A A
Sbjct: 312 SQILTYKNPKPYKMAIA 328


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 406 SQLIWNTHPRPYKIAAA 356
           SQ++   +P+PYK+A A
Sbjct: 313 SQILTYKNPKPYKMAIA 329


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 406 SQLIWNTHPRPYKIAAA 356
           SQ++   +P+PYK+A A
Sbjct: 313 SQILTYKNPKPYKMAIA 329


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 180 CYCSILFSRQKSPS 221
           CYC I F R+  P+
Sbjct: 425 CYCPIKFGRKADPN 438


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 536 LDNKAIIGAF*PYICARPSIQSL 468
           +D  A  G + P++  RP +Q L
Sbjct: 17  MDGGAGAGLYEPHVAHRPGLQGL 39


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 501 RSESANYSLIIKLVNGLVSESYWG 572
           R+ S +YS +I+ V    +E  WG
Sbjct: 61  RARSVSYSTVIQSVPHPETEKDWG 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,990
Number of Sequences: 336
Number of extensions: 3478
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)