Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9f14
(672 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 31 0.56
U97189-1|AAC48164.1| 623|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 4.0
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 4.0
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 4.0
Z48638-6|CAA88567.1| 541|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z73422-5|CAE54882.1| 323|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z73422-4|CAA97770.1| 319|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z68270-9|CAE54911.1| 307|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z68270-8|CAC35869.1| 309|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z68270-7|CAA92571.2| 109|Caenorhabditis elegans Hypothetical pr... 28 6.9
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 28 6.9
L37867-1|AAA63155.1| 319|Caenorhabditis elegans homeodomain pro... 28 6.9
AF202930-1|AAK69380.1| 109|Caenorhabditis elegans Ny protein. 28 6.9
Z93379-3|CAB07590.1| 282|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z92833-9|CAD54141.2| 665|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81143-9|CAB03520.1| 440|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z75713-10|CAB00057.1| 440|Caenorhabditis elegans Hypothetical p... 27 9.2
AL023842-11|CAD54168.2| 665|Caenorhabditis elegans Hypothetical... 27 9.2
AF026208-2|AAB71269.3| 774|Caenorhabditis elegans Prion-like-(q... 27 9.2
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 574 EQRQVKQHSNQRPPQHRPHEHSRPVLTPPR 485
+Q+Q +Q QRPPQ +P +P PP+
Sbjct: 249 QQQQQQQQQQQRPPQPQPQPQPQPPQRPPQ 278
>U97189-1|AAC48164.1| 623|Caenorhabditis elegans Hypothetical
protein C48B6.4 protein.
Length = 623
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 123 MNTKKKSLL*GSVERFDYENIFNLLRKHQIMLNHV 19
MN KK+ LL + +Y+N+ N+ H+I+ N V
Sbjct: 561 MNLKKQQLLIFKMGESEYQNVVNVTHFHEIVKNQV 595
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 225 CVVQSACRTRPQAPPSAVCMHRLDACAHRC 314
C V SAC R +A+C++R D+ +C
Sbjct: 485 CRVYSACSKRNTCDKNAICLNRFDSYTCQC 514
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 225 CVVQSACRTRPQAPPSAVCMHRLDACAHRC 314
C V SAC R +A+C++R D+ +C
Sbjct: 1069 CRVYSACSKRNTCDKNAICLNRFDSYTCQC 1098
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 225 CVVQSACRTRPQAPPSAVCMHRLDACAHRC 314
C V SAC R +A+C++R D+ +C
Sbjct: 485 CRVYSACSKRNTCDKNAICLNRFDSYTCQC 514
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 225 CVVQSACRTRPQAPPSAVCMHRLDACAHRC 314
C V SAC R +A+C++R D+ +C
Sbjct: 1069 CRVYSACSKRNTCDKNAICLNRFDSYTCQC 1098
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 225 CVVQSACRTRPQAPPSAVCMHRLDACAHRC 314
C V SAC R +A+C++R D+ +C
Sbjct: 1069 CRVYSACSKRNTCDKNAICLNRFDSYTCQC 1098
>Z48638-6|CAA88567.1| 541|Caenorhabditis elegans Hypothetical
protein ZK892.3 protein.
Length = 541
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 72 NQIVLPILITMIFF*CSLSSKLNLSHIGPNRE 167
N IV I IT+++F S +NL H+G + E
Sbjct: 454 NLIVCSIGITVVYFYLEESRNVNLQHVGQDEE 485
>Z73422-5|CAE54882.1| 323|Caenorhabditis elegans Hypothetical
protein B0564.10b protein.
Length = 323
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 550 SNQRPPQHRPHEHSRPVLTPPRDIRIAAP-TTVLRRTVDRQLDVEHLPSSVP 398
S+ P H P+ + + PP DI P +L V ++ D HL +S P
Sbjct: 44 SSLAPLTHNPYAFNYSIPLPPTDITTKLPKLELLSLDVKQEQDDNHLDTSSP 95
>Z73422-4|CAA97770.1| 319|Caenorhabditis elegans Hypothetical
protein B0564.10a protein.
Length = 319
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 550 SNQRPPQHRPHEHSRPVLTPPRDIRIAAP-TTVLRRTVDRQLDVEHLPSSVP 398
S+ P H P+ + + PP DI P +L V ++ D HL +S P
Sbjct: 44 SSLAPLTHNPYAFNYSIPLPPTDITTKLPKLELLSLDVKQEQDDNHLDTSSP 95
>Z68270-9|CAE54911.1| 307|Caenorhabditis elegans Hypothetical
protein ZC410.7c protein.
Length = 307
Score = 27.9 bits (59), Expect = 6.9
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 538 PPQHRPHEHSRPV 500
PPQH P+EH++P+
Sbjct: 34 PPQHFPYEHTKPI 46
>Z68270-8|CAC35869.1| 309|Caenorhabditis elegans Hypothetical
protein ZC410.7b protein.
Length = 309
Score = 27.9 bits (59), Expect = 6.9
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 538 PPQHRPHEHSRPV 500
PPQH P+EH++P+
Sbjct: 34 PPQHFPYEHTKPI 46
>Z68270-7|CAA92571.2| 109|Caenorhabditis elegans Hypothetical
protein ZC410.7a protein.
Length = 109
Score = 27.9 bits (59), Expect = 6.9
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 538 PPQHRPHEHSRPV 500
PPQH P+EH++P+
Sbjct: 34 PPQHFPYEHTKPI 46
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -3
Query: 544 QRPPQHRPHEHSRPVLTPPRDIRIAAPTTVLRRTVDRQLDVEHLPSSVP 398
+R P HR SRP+LTP ++ + P T TV + P S P
Sbjct: 2069 KRLPGHRTT--SRPMLTPSKNFSLGTPPTPSPSTVSTTPFRIYTPGSAP 2115
>L37867-1|AAA63155.1| 319|Caenorhabditis elegans homeodomain
protein protein.
Length = 319
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 550 SNQRPPQHRPHEHSRPVLTPPRDIRIAAP-TTVLRRTVDRQLDVEHLPSSVP 398
S+ P H P+ + + PP DI P +L V ++ D HL +S P
Sbjct: 44 SSLAPLTHNPYAFNYSIPLPPTDITTKLPKLELLSLDVKQEQDDNHLDTSSP 95
>AF202930-1|AAK69380.1| 109|Caenorhabditis elegans Ny protein.
Length = 109
Score = 27.9 bits (59), Expect = 6.9
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -3
Query: 538 PPQHRPHEHSRPV 500
PPQH P+EH++P+
Sbjct: 34 PPQHFPYEHTKPI 46
>Z93379-3|CAB07590.1| 282|Caenorhabditis elegans Hypothetical
protein F21H7.4 protein.
Length = 282
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
Frame = -3
Query: 559 KQHSNQRPPQ--HRP-HEHSRPVLTPPR 485
++H + RPP HRP H RP PPR
Sbjct: 72 EEHGHHRPPHRPHRPPHRPHRPPRPPPR 99
>Z92833-9|CAD54141.2| 665|Caenorhabditis elegans Hypothetical
protein F38A6.3d protein.
Length = 665
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -3
Query: 577 HEQRQVKQHSNQRPPQHRPHEHSRP 503
H+ R+V+Q ++ P QHRPH H+ P
Sbjct: 549 HKVREVEQ-LDRLPRQHRPHCHTVP 572
>Z81143-9|CAB03520.1| 440|Caenorhabditis elegans Hypothetical
protein ZK265.8 protein.
Length = 440
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 553 HSNQRPPQHRPHEHSRPVLTPPRD 482
+ N+ P H P+ HS +TPP D
Sbjct: 348 YDNESPKLHSPNSHSYNSVTPPLD 371
>Z75713-10|CAB00057.1| 440|Caenorhabditis elegans Hypothetical
protein ZK265.8 protein.
Length = 440
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 553 HSNQRPPQHRPHEHSRPVLTPPRD 482
+ N+ P H P+ HS +TPP D
Sbjct: 348 YDNESPKLHSPNSHSYNSVTPPLD 371
>AL023842-11|CAD54168.2| 665|Caenorhabditis elegans Hypothetical
protein F38A6.3d protein.
Length = 665
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -3
Query: 577 HEQRQVKQHSNQRPPQHRPHEHSRP 503
H+ R+V+Q ++ P QHRPH H+ P
Sbjct: 549 HKVREVEQ-LDRLPRQHRPHCHTVP 572
>AF026208-2|AAB71269.3| 774|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 40
protein.
Length = 774
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -3
Query: 538 PPQHRPHEHSRPVLTPPRDIRIAAPTTVLRRTVDRQLDVEHL 413
P ++ + P PPR IRI P + + +LD E L
Sbjct: 203 PDEYEEEATTEPTSPPPRQIRIQLPDKNGKTQPEEELDYEDL 244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,548,890
Number of Sequences: 27780
Number of extensions: 195767
Number of successful extensions: 707
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -