BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9f13
(666 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y17704-1|CAA76824.2| 401|Anopheles gambiae hypothetical protein... 31 0.025
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 24 5.0
AY752897-1|AAV30071.1| 107|Anopheles gambiae peroxidase 4B prot... 24 5.0
AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein. 24 5.0
AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical prot... 23 6.5
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 23 8.7
>Y17704-1|CAA76824.2| 401|Anopheles gambiae hypothetical protein
protein.
Length = 401
Score = 31.5 bits (68), Expect = 0.025
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -3
Query: 364 TVIPDVAAMREDVVHEPKVAFLYVLLDRIEGLPEADLHFRIGPS--RYFYYHVDEALSFV 191
T + D R+D + +P F+++L ++ L E + H + RY+ H+++ F
Sbjct: 220 TGVFDTRKDRDDYISQPLTVFVHMLRWQLANL-EFEFHLSLAERFPRYYSLHIEQIFFFA 278
Query: 190 GP*WNVVHGR 161
P W R
Sbjct: 279 PPHWQKAEKR 288
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 23.8 bits (49), Expect = 5.0
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = +1
Query: 181 TMGRQSSTPRQHGSRST*MDQCENGDQPRGGPQSYQAGRKERQPSVREQRLPSSR 345
T+G +P Q + Q Q + QS Q + +Q + QR PSS+
Sbjct: 217 TVGGTPPSPEQLQNHQQTAQQSSQQQQQQQQQQSLQQQQLSQQQQQQRQRQPSSQ 271
>AY752897-1|AAV30071.1| 107|Anopheles gambiae peroxidase 4B
protein.
Length = 107
Score = 23.8 bits (49), Expect = 5.0
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -3
Query: 598 LYIVQLLRVRVPGIDRYQLPIGLAFVDES*RTEDLYGVNVTATRDAL 458
L + + R R G+ RY L + + R EDLYG AT D L
Sbjct: 5 LKAIDIHRARDHGLARYNDFRELCGLGRATRWEDLYGEIPRATVDRL 51
>AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein.
Length = 406
Score = 23.8 bits (49), Expect = 5.0
Identities = 9/22 (40%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +2
Query: 371 PQTWENPNHV-DPDTGARGDND 433
P+ W+ P H+ DPD D D
Sbjct: 230 PEDWDKPEHIPDPDATKPDDWD 251
>AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical protein
protein.
Length = 257
Score = 23.4 bits (48), Expect = 6.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 148 RRPYIAHARHSTMGRQSSTPRQHGSRS 228
R P + +HS R+SS+PR RS
Sbjct: 63 RMPPVPPPKHSQRRRRSSSPRTRQFRS 89
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
ion/proton exchanger 3 protein.
Length = 1221
Score = 23.0 bits (47), Expect = 8.7
Identities = 19/61 (31%), Positives = 23/61 (37%)
Frame = +1
Query: 199 STPRQHGSRST*MDQCENGDQPRGGPQSYQAGRKERQPSVREQRLPSSRLHLELRCPAAD 378
+TP + GS D C G + A KE S R LPSS L C A
Sbjct: 35 TTPTEGGSWHN--DTCYGGGGANSRLVTVPAPAKELTDSSRSGGLPSSSSSSSLSCLLAT 92
Query: 379 L 381
+
Sbjct: 93 I 93
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,402
Number of Sequences: 2352
Number of extensions: 15016
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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