Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9f12
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.46 
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    25   0.61 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.1  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    24   1.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    24   1.4  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   3.3  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   3.3  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            22   4.3  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -1

Query: 448 IFQCGFCSTEVFFTLKAFFSIFVIQFLPFGDKLLQPWIGIRNLQSLIRYKF-Y*FCRNRL 272
           IF C  CS + F    A F+++++  L F   L    +G+R  Q  I   F Y  C   +
Sbjct: 104 IFNC--CSKKSFRMNFAIFNLYMVLLLLFDAYLWISSVGVRMFQYYIGRSFTYYVCNTTI 161

Query: 271 ARF*EAVL 248
                +VL
Sbjct: 162 FLIFHSVL 169


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 335 YPWLKQLITKRKELDHEN 388
           YPW+K+  T RK    EN
Sbjct: 115 YPWMKEKKTTRKSSQQEN 132


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 36   FILYYVICLEIVAASWPKG*DVRG 107
            F+ YY IC  ++   W    D RG
Sbjct: 2101 FLAYYEICTNVIKKGWKVVRDRRG 2124


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -1

Query: 400 AFFSIFVIQFLPFGDKLLQPWIGIRNLQSLIRYKFY 293
           A FS+F+ +      +L+  ++G+RN+  L+    Y
Sbjct: 78  ANFSLFIPKHRRIAGRLIDIFLGMRNVDDLLSVAVY 113


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -1

Query: 442 QCGFCSTEVFFTLKAFFSIFVIQFL 368
           Q GF + ++  T+ A  +IF++ F+
Sbjct: 311 QAGFSTKDIGLTINAGLAIFILYFI 335


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = +2

Query: 335 YPWLKQLITKRKELDHENRKESFQSEKHF 421
           YPW++    +++      R ++ + EK F
Sbjct: 233 YPWMRSQFERKRGRQTYTRYQTLELEKEF 261


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = +2

Query: 335 YPWLKQLITKRKELDHENRKESFQSEKHF 421
           YPW++    +++      R ++ + EK F
Sbjct: 235 YPWMRSQFERKRGRQTYTRYQTLELEKEF 263


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 335 YPWLKQLITKRKELDHEN 388
           YPW+K+  T RK     N
Sbjct: 115 YPWMKEKKTTRKSSQQGN 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,869
Number of Sequences: 336
Number of extensions: 3333
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)