Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9f12
         (718 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_1080 + 11241590-11241625,11241723-11242018,11242113-112422...    31   1.2  
09_06_0061 + 20596360-20596618,20597039-20597158,20597329-205974...    30   1.6  
12_01_0855 + 8023266-8023459,8023830-8023866,8023911-8023966,802...    29   4.9  

>12_01_1080 +
           11241590-11241625,11241723-11242018,11242113-11242269,
           11242381-11242449,11242551-11243480,11243868-11243906,
           11244414-11244478,11244663-11244768,11244850-11245050,
           11247001-11247201,11247756-11247779,11249425-11249586,
           11249676-11249915,11250267-11250479,11250618-11250968,
           11251041-11251193,11251649-11251858,11252049-11252267,
           11252365-11252482,11252879-11253828,11254023-11254220,
           11254294-11254553,11255316-11255505,11255817-11256169,
           11258278-11258386,11258466-11258615,11258748-11258844,
           11259315-11259415
          Length = 2065

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
 Frame = +2

Query: 152 IVSIVSYHG*PTLQTETHSASRKKQM--PRAGVVQYSFLESGQTITAELIKFIAYQRLQI 325
           +++  S HG P+       AS++ +   P + V Q    +    +  EL     Y +  I
Sbjct: 432 LLTAYSDHGKPSKDCTNKFASQEMEANTPTSSVPQKDHSKLSSWLPPELCAI--YMKKGI 489

Query: 326 PYTYPWLKQLITKRKEL 376
           P  YPW  +LIT  K L
Sbjct: 490 PELYPWQIELITNPKNL 506


>09_06_0061 + 20596360-20596618,20597039-20597158,20597329-20597462,
            20597578-20597730,20597816-20597927,20598022-20598352,
            20598524-20598737,20598842-20598931,20599669-20599924,
            20600029-20600141,20600733-20600831,20600915-20600980,
            20601018-20601167,20601278-20601368,20601710-20601749,
            20603888-20605247,20605478-20605507,20605834-20605885,
            20606264-20606397,20606513-20606665,20607089-20607202
          Length = 1356

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +2

Query: 548  EVYRLILPATCHRPQCHSSLIASDQKIHRNV 640
            E YR++  + C R Q H++    D+ +HR +
Sbjct: 1004 ETYRILTQSLCRRGQVHTAATLLDEMLHRGI 1034


>12_01_0855 +
           8023266-8023459,8023830-8023866,8023911-8023966,
           8025102-8026215
          Length = 466

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 119 AIHWCSNPIL-IIVSIVSYHG*PTLQTETHSASR 217
           A HWC N +L  +V+ V   G PT++   H   R
Sbjct: 165 AFHWCCNQLLQHLVNSVRTQGQPTVEPNVHGHQR 198


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,152,230
Number of Sequences: 37544
Number of extensions: 321703
Number of successful extensions: 684
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)