Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9f12
         (718 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p...    29   2.5  
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.      29   2.5  
AF067940-2|AAC19203.1|  219|Caenorhabditis elegans Hypothetical ...    29   2.5  
Z19154-8|CAE17741.1|  335|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
           protein C47D12.1c protein.
          Length = 4053

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 536 ITCKEVYRLILPATCHRPQCHSSLIASDQK 625
           + C +V+  +LP T ++PQ HSS+   D+K
Sbjct: 628 VMCMDVF--VLPTTRNQPQMHSSMRTKDEK 655


>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical
           protein C47D12.1b protein.
          Length = 4061

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 536 ITCKEVYRLILPATCHRPQCHSSLIASDQK 625
           + C +V+  +LP T ++PQ HSS+   D+K
Sbjct: 628 VMCMDVF--VLPTTRNQPQMHSSMRTKDEK 655


>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical
           protein C47D12.1a protein.
          Length = 4064

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 536 ITCKEVYRLILPATCHRPQCHSSLIASDQK 625
           + C +V+  +LP T ++PQ HSS+   D+K
Sbjct: 628 VMCMDVF--VLPTTRNQPQMHSSMRTKDEK 655


>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
          Length = 4064

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 536 ITCKEVYRLILPATCHRPQCHSSLIASDQK 625
           + C +V+  +LP T ++PQ HSS+   D+K
Sbjct: 628 VMCMDVF--VLPTTRNQPQMHSSMRTKDEK 655


>AF067940-2|AAC19203.1|  219|Caenorhabditis elegans Hypothetical
           protein F36F12.4 protein.
          Length = 219

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 178 LTHPSNRNAFCFTEETDATRRC-RSIQLPRIWPNDYGRINKI 300
           + + +  NA  FT + +  R   R++ LP+IWP+  G   +I
Sbjct: 56  VVYSTRTNAISFTTKIEPRRDTQRAVNLPQIWPSQNGLARRI 97


>Z19154-8|CAE17741.1|  335|Caenorhabditis elegans Hypothetical
           protein C40H1.9 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 265 IWPNDYGRINKIYSVSKTADSLYLS 339
           IW N+Y R+N  Y + + AD  Y S
Sbjct: 273 IWYNNYMRLNDTYQICEEADGDYCS 297


>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
           protein F55F10.1 protein.
          Length = 4368

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = +1

Query: 181 THPSNRNAFCFTEETDATRRCRSIQLPRIWPNDYGRINKIYSVSKTADSLYLSMVEATY 357
           THP+ R   C    TDA +R       R+ P    R  + + VS+TAD   LS++ + Y
Sbjct: 558 THPNFRLFACMNPATDAGKR-------RLPPGVRTRFTEFF-VSETADPHQLSLIVSAY 608


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,551,233
Number of Sequences: 27780
Number of extensions: 312212
Number of successful extensions: 663
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)