Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9f10
         (760 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0310 + 2446054-2446224,2446342-2446464,2446570-2446652,244...    78   9e-15
07_01_0714 - 5451246-5451408,5453401-5453534,5453608-5453796,545...    30   2.3  
10_08_0986 + 22050631-22051224,22051493-22051703,22051791-220520...    28   7.0  
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265...    28   9.3  

>05_01_0310 +
           2446054-2446224,2446342-2446464,2446570-2446652,
           2446762-2446895,2448110-2448185,2448268-2448367
          Length = 228

 Score = 77.8 bits (183), Expect = 9e-15
 Identities = 44/131 (33%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
 Frame = +3

Query: 348 AETVLKTLQSAWQNERLSPEILPHQNDMVECMLGQIQHMERNINKLSKT---DLRTSIHK 518
           A T ++ L+ AW+NE+ SPEIL   + +V  +  QIQ +E  ++   ++   DL  S+++
Sbjct: 19  ASTDVELLKRAWRNEKASPEILRFDSPLVSRVREQIQLLEETLDDFGESGVDDLVVSLYQ 78

Query: 519 MEISRIKFIICNYLKTRLNKIEKYCIPILNQERQRIETDTNYLTPSEYKYAQEYVLNMEN 698
           M++ R  F++ +YL+ RL KIEKY + I      + E   + L+  E ++A+     ME 
Sbjct: 79  MDLDRTLFLLRSYLRLRLQKIEKYMMHI-----SKSEDLLSRLSQQEQRFAKSCTEMMEK 133

Query: 699 HMKNVVLNKMP 731
           H++  VL+K+P
Sbjct: 134 HLEQSVLSKLP 144


>07_01_0714 -
           5451246-5451408,5453401-5453534,5453608-5453796,
           5454313-5454825,5455815-5456856,5457283-5457380,
           5458224-5458451
          Length = 788

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 13/53 (24%), Positives = 26/53 (49%)
 Frame = +3

Query: 600 ILNQERQRIETDTNYLTPSEYKYAQEYVLNMENHMKNVVLNKMPGNMQVFXNE 758
           +LN   QR++ +   + PS   Y   Y   +   + +VV   +  +++VF +E
Sbjct: 270 LLNAHNQRLQCNMQTIHPSSTSYGGAYTAALAQQVFSVVAQALSDSVEVFGDE 322


>10_08_0986 +
           22050631-22051224,22051493-22051703,22051791-22052082,
           22052415-22052780,22052878-22052955,22053099-22053327
          Length = 589

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/69 (23%), Positives = 30/69 (43%)
 Frame = +3

Query: 552 NYLKTRLNKIEKYCIPILNQERQRIETDTNYLTPSEYKYAQEYVLNMENHMKNVVLNKMP 731
           N+ +  +N  E++C     + R  I     Y+TP  +  +++YV       KN+ + K  
Sbjct: 88  NFPRENMNYRERHCPTETKKLRCLIPAPKGYVTPFPWPKSRDYVPYANAPYKNLTVEKAV 147

Query: 732 GNMQVFXNE 758
            N   F  +
Sbjct: 148 QNWVQFEGD 156


>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
            2657523-2657649,2657731-2657812,2658172-2658196
          Length = 2621

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
 Frame = +3

Query: 420  QNDMVECMLGQ-IQHMERNINKLSKTDLRTSIHKMEI----SRIKFIICNYLKTRLNKIE 584
            QN +VE      ++H+ER ++  S+T  +   H ME+    S+++ I    L   LN   
Sbjct: 1936 QNSVVESARADAVRHLERIMHMQSQTKRKQIDHLMELNSTSSQLREIFSELLHHLLNTFS 1995

Query: 585  KYCIPILNQERQRIETDTNYLTPSEYKYAQEYVLNMENHMKNVVLNK 725
            K  + I+N     +++   ++  +      E  +   +H+ N + +K
Sbjct: 1996 K-DVDIINYMESFVKSSDKWMDSTS---MVEIPITSNHHLSNSISSK 2038


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,081,412
Number of Sequences: 37544
Number of extensions: 225622
Number of successful extensions: 478
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)