Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9f08
         (607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     29   0.030
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   4.6  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.1  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.1  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   8.1  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 29.1 bits (62), Expect = 0.030
 Identities = 20/64 (31%), Positives = 29/64 (45%)
 Frame = -1

Query: 577 FTNVTNITILKISNYSM*ITLSLVCFARLSSRACIVSTRGAKCEQSIYCEQSSGCNCAYG 398
           F NVTN T+  ++     I++ L  F  LS R  I        +  ++C +SS  NC   
Sbjct: 450 FHNVTNTTLQNLTPQLNYISMKLQSFPLLSQRHQI--------DAKMFCNESSVSNCENE 501

Query: 397 RCLC 386
            C C
Sbjct: 502 YCEC 505


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = +3

Query: 261 RRRRTLTSMDGGRAVGLYC 317
           R  R +   +GG+  G++C
Sbjct: 178 REMRAIVGFEGGKGDGIFC 196


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 262 RHCFTYYFSG 233
           RHCF Y F G
Sbjct: 12  RHCFGYPFQG 21


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/41 (21%), Positives = 21/41 (51%)
 Frame = +1

Query: 43  NLFKLTKFIEVKKKDVNTYLYYKVYGIIASNIMSHVTSIQL 165
           N+F +      +K D    L+ K+ G++  +I++  T+  +
Sbjct: 22  NIFGIVPPYSFEKPDSQKSLWKKIQGVVLVSIIAAGTAYSI 62


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/41 (21%), Positives = 21/41 (51%)
 Frame = +1

Query: 43  NLFKLTKFIEVKKKDVNTYLYYKVYGIIASNIMSHVTSIQL 165
           N+F +      +K D    L+ K+ G++  +I++  T+  +
Sbjct: 22  NIFGIVPPYSFEKPDSQKSLWKKIQGVVLVSIIAAGTAYSI 62


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 91  NTYLYYKVYGIIASNIMSH 147
           N Y YY     ++S+ MSH
Sbjct: 254 NNYPYYSNMDYLSSSTMSH 272


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,383
Number of Sequences: 336
Number of extensions: 2477
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)