Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9f05
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    25   0.49 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.5  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   6.0  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   6.0  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +3

Query: 456 KRLALWTIRAIGLSHYKLLFAISFITMFVSMWI 554
           K L +W +       YK+    SF   F S WI
Sbjct: 18  KALTVWHVENPTYRLYKIFVVFSFAVTFFSAWI 50



 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 119 PASYYLRKGYSVLYFIMAWLNYDYSATNIDTD 214
           P  Y     + ++YFI+A+     + TN+ TD
Sbjct: 155 PFDYKQPVVFDLVYFILAFACISIAYTNVSTD 186


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +3

Query: 555 TNTAATTMMVPINSALLKVFEDQNSLKMYEPNKNGDMVAT 674
           T T  TT    +NS  L  F    S  +Y P+   D+  T
Sbjct: 10  TTTTTTTTSSALNSTPLIEFNISTSNYLYTPSSTIDLYNT 49


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +3

Query: 555 TNTAATTMMVPINSALLKVFEDQNSLKMYEPNKNGDMVAT 674
           T T  TT    +NS  L  F    S  +Y P+   D+  T
Sbjct: 10  TTTTTTTTSSALNSTPLIEFNISTSNYLYTPSSTIDLYNT 49


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 618 DQNSLKMYEPNKNGDMVATDFSSCYFCAIT 707
           D+ SL++ + N +G +       C F AIT
Sbjct: 184 DEQSLRVPKVNSHGKIKTFKCKQCDFVAIT 213


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 269 QHQGVCTPLIFLWW 228
           +HQ +C PL +  W
Sbjct: 138 RHQAICYPLTYCSW 151


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 27  KRSDFAMDNTAKDSDVSIQNTDED 98
           KR  F  +N++ D D+ + N D+D
Sbjct: 200 KRPKF--ENSSCDEDIDVTNIDDD 221


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,683
Number of Sequences: 336
Number of extensions: 3983
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)