Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9f04
(664 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0038 + 11790075-11790302,11790397-11790542,11790915-117910... 74 1e-13
09_03_0039 + 11799277-11799486,11799565-11799710,11800758-118008... 70 2e-12
02_02_0080 + 6598427-6598663,6599246-6599391,6599567-6599669,660... 69 4e-12
08_02_0585 + 19014674-19014871,19014987-19015132,19016742-190168... 65 5e-11
01_07_0239 + 42222024-42222133,42222220-42222301,42222396-422224... 33 0.15
04_04_1538 + 34239913-34241274,34241468-34241578 33 0.27
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 32 0.47
03_06_0222 + 32466379-32466741,32466849-32466948,32467443-324675... 31 0.82
05_04_0173 + 18724367-18724476,18724570-18724651,18724750-187248... 30 1.9
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722... 29 2.5
02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021... 29 4.4
11_04_0274 - 15667178-15667444,15668352-15668678,15669430-156695... 28 5.8
04_01_0319 - 4291144-4293402 28 5.8
>09_03_0038 +
11790075-11790302,11790397-11790542,11790915-11791017,
11791148-11791334,11791466-11791559,11791702-11791855,
11792189-11792305,11792695-11792808,11793629-11793811,
11794209-11794494,11794592-11794713,11794746-11794802,
11794803-11794900,11795036-11795213,11795355-11795455,
11795530-11795629,11795751-11795828,11796785-11796862,
11796956-11797138
Length = 868
Score = 73.7 bits (173), Expect = 1e-13
Identities = 49/153 (32%), Positives = 74/153 (48%)
Frame = +3
Query: 204 GEYLLPGDVVPTFYDVLLIYDVDPATNFSYFGRVDIKLNILKPTSKIVLHAQGFSIPEEE 383
G+ LP P Y++ L D+D + G + +++ PT +VL+A ++
Sbjct: 16 GQARLPRFAAPRRYELRLRPDLDACV---FTGDASVVVDVSAPTRFLVLNAADLAVDRAS 72
Query: 384 VTLTGPKEVAVDNVKLNDTFNLLTLSLSQQLDEGDNYVLRIPFYGNLQQDLDGTYISKYV 563
+ G +A V L + +L L +L G+ VL + F G L + G Y SKY
Sbjct: 73 IRFQG---LAPTEVSLFEDDEILVLEFDGELPLGEG-VLAMDFNGTLNDQMRGFYRSKYE 128
Query: 564 DKKTKKNEYLVTTQFEAISARKGFPCLDEPMYK 662
K KN + TQFEA+ AR+ FPC DEP +K
Sbjct: 129 YKGETKN--MAVTQFEAVDARRCFPCWDEPAFK 159
>09_03_0039 +
11799277-11799486,11799565-11799710,11800758-11800860,
11800996-11801182,11801299-11801392,11801530-11801683,
11801963-11802067,11802151-11802267,11802688-11802801,
11803171-11803260,11803875-11804057,11809196-11809550,
11809574-11809643,11809993-11810167,11810251-11810351,
11810390-11810516,11810639-11810716,11811926-11812270
Length = 917
Score = 69.7 bits (163), Expect = 2e-12
Identities = 49/153 (32%), Positives = 76/153 (49%)
Frame = +3
Query: 204 GEYLLPGDVVPTFYDVLLIYDVDPATNFSYFGRVDIKLNILKPTSKIVLHAQGFSIPEEE 383
G+ LP P Y++ L D+ A FS G + +++ PT +VL+A ++
Sbjct: 10 GQARLPRFAAPRRYELRLRPDL-AACVFS--GEASVAVDVSAPTRFLVLNAADLAVDRAS 66
Query: 384 VTLTGPKEVAVDNVKLNDTFNLLTLSLSQQLDEGDNYVLRIPFYGNLQQDLDGTYISKYV 563
+ G +A V + + +L L + +L G+ VL + F G L + G Y SKY
Sbjct: 67 IRFQG---LAPAEVSVFEEDEILVLEFAGELPLGEG-VLAMRFNGTLNDQMRGFYRSKYE 122
Query: 564 DKKTKKNEYLVTTQFEAISARKGFPCLDEPMYK 662
K KN + TQFE++ AR+ FPC DEP +K
Sbjct: 123 YKGETKN--MAVTQFESVDARRCFPCWDEPSFK 153
>02_02_0080 +
6598427-6598663,6599246-6599391,6599567-6599669,
6600407-6600593,6600699-6600792,6601290-6601443,
6601751-6601855,6601937-6602053,6602248-6602361,
6602891-6603073,6603207-6603486,6603565-6603686,
6603763-6603860,6603941-6604118,6604439-6604553,
6604656-6604723,6604825-6604902,6604986-6605060,
6605156-6605338
Length = 878
Score = 68.5 bits (160), Expect = 4e-12
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Frame = +3
Query: 204 GEYLLPGDVVPTFYDVLLIYDVDPATNFSYFGRVDIKLNILKPTSKIVLHAQGFSIPEEE 383
G+ LPG P YD+ L+ D+D ++ G VD+ +++ PT +VL+A +
Sbjct: 13 GQARLPGFAAPRRYDLRLVPDLDGC---AFTGSVDVSVDVTAPTRFLVLNAAELEVSPGG 69
Query: 384 VTLT---GPKEVAVDNVKLNDTFNLLTLSLSQQLDEGDNYVLRIPFYGNLQQDLDGTYIS 554
V +E+ V +L + ++ L G+ L I F G L + G Y S
Sbjct: 70 VQFKPHGAEQELHPAEVTNVPEDEILIIRFNEVLPVGEG-TLVIAFKGTLNDKMHGFYRS 128
Query: 555 KYVDKKTKKNEYLVTTQFEAISARKGFPCLDEPMYK 662
Y KKN + TQFE AR+ FPC DEP +K
Sbjct: 129 VYELNGEKKN--MAVTQFEPADARRCFPCWDEPSFK 162
>08_02_0585 +
19014674-19014871,19014987-19015132,19016742-19016844,
19017064-19017250,19017368-19017461,19017570-19017723,
19018076-19018192,19018276-19018296,19019096-19019209,
19019970-19020152,19021032-19021239,19021326-19021447,
19021559-19021656,19021875-19022052,19022130-19022244,
19022331-19022398,19022526-19022603,19023737-19023814,
19023897-19024082
Length = 815
Score = 64.9 bits (151), Expect = 5e-11
Identities = 49/153 (32%), Positives = 73/153 (47%)
Frame = +3
Query: 204 GEYLLPGDVVPTFYDVLLIYDVDPATNFSYFGRVDIKLNILKPTSKIVLHAQGFSIPEEE 383
G+ LP P YD+ L D+ A FS G + + + PT +VL+A E
Sbjct: 10 GQARLPRCASPLSYDLRLRPDL-AACAFS--GSAAVAVAVSAPTRFLVLNAA-------E 59
Query: 384 VTLTGPKEVAVDNVKLNDTFNLLTLSLSQQLDEGDNYVLRIPFYGNLQQDLDGTYISKYV 563
+ + G ++ V + ++ + Q L G+ VL++ F G L + G Y SKY
Sbjct: 60 LAVDGSSDLVPSEVVQFEEDEIVVIGFGQDLPIGEG-VLKMDFTGTLNDQMRGFYRSKYE 118
Query: 564 DKKTKKNEYLVTTQFEAISARKGFPCLDEPMYK 662
K +N + TQFEA AR+ FPC DEP +K
Sbjct: 119 YKGESRN--MAVTQFEAADARRCFPCWDEPAFK 149
>01_07_0239 +
42222024-42222133,42222220-42222301,42222396-42222486,
42222702-42222814,42222912-42222984,42223080-42223178,
42223201-42223406,42223693-42223832,42223912-42223969,
42224067-42224137,42224207-42224741
Length = 525
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 474 LDEGDNYVLR-IPFYGNLQQDLDGTYISKYVDKKTKKNEYLVTTQFEAISARKGFP 638
LDE ++ R + + L+Q +GTY Y+ K+T+ NE + + + R+GFP
Sbjct: 11 LDESPSWGSRSVDCFEKLEQIGEGTYGQVYMAKETETNEIVALKKIRMDNEREGFP 66
>04_04_1538 + 34239913-34241274,34241468-34241578
Length = 490
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Frame = +1
Query: 163 CILFYCCPVR---CCPRANTCCPAMW--CR-HSTTCS 255
CI++ CCPV CC +TCCP + C + TCS
Sbjct: 417 CIVWGCCPVEGATCCKDHSTCCPKEYPVCNAKARTCS 453
>02_05_0232 + 27041793-27042087,27042822-27042943,27043098-27043219,
27043601-27043705,27043828-27044257,27044356-27044517,
27044565-27045260,27045349-27046128,27046441-27046654,
27047621-27047981,27047993-27048140,27048276-27048419,
27048784-27048888,27049749-27049794,27050089-27050255,
27050338-27050490,27050654-27050950,27051053-27051220,
27051298-27051363,27051451-27051927,27052031-27052768,
27052935-27053120
Length = 1993
Score = 31.9 bits (69), Expect = 0.47
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = -3
Query: 299 AEVAEVRRRIHVVNEEHVVECRHHIAGQQVFARGQ---QRTGQQ*NKMQARHCTISTAYK 129
+E+ +++H + +++ E + A ++ FAR + Q T ++ NK+++RH T A
Sbjct: 1519 SEMLSALKKVHDLEHQYLNELKRREAVEETFARQKEEIQETKRELNKIRSRHMTEIKA-- 1576
Query: 128 HEVQLFRLPRF 96
HE +L RF
Sbjct: 1577 HEEKLAESIRF 1587
>03_06_0222 +
32466379-32466741,32466849-32466948,32467443-32467547,
32467627-32467789,32467995-32468115,32468625-32468705,
32468813-32468911,32468955-32468986,32468987-32469137,
32469477-32469563,32470290-32470409,32470514-32470645,
32470743-32470840,32470919-32471042,32471126-32471233,
32471822-32471957,32472751-32472861,32472963-32473026,
32473133-32473205,32473762-32473938,32474012-32474122,
32474189-32474449,32474811-32474981,32475073-32475228,
32475590-32475823,32475936-32476103,32476316-32476425,
32476513-32477041
Length = 1394
Score = 31.1 bits (67), Expect = 0.82
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Frame = +3
Query: 396 GPKEVAVD-------NVKLNDTFNLLTLSLSQQLDEGDNYVLRIPFYGNLQQDLDGTYIS 554
GP+E+A++ + LND LL ++ S + D D +P+ + QDL +I
Sbjct: 240 GPQEIAMNILAEMKSTLGLNDC-KLLCINSSTEADGADAENSWLPYIKDFMQDLASNHII 298
Query: 555 KYVDKKTK-KNEYLVTTQ 605
Y+++K + N+ + TT+
Sbjct: 299 PYMEQKIRVLNQQVATTR 316
>05_04_0173 +
18724367-18724476,18724570-18724651,18724750-18724840,
18725060-18725172,18725270-18725342,18725445-18725565,
18725665-18725782,18726609-18726748,18726824-18726881,
18727007-18727077,18727181-18727733
Length = 509
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 474 LDEGDNYVLR-IPFYGNLQQDLDGTYISKYVDKKTKKNEYLVTTQFEAISARKGFP 638
LDE ++ R + + L+Q +GTY Y+ ++T+ E + + + R+GFP
Sbjct: 11 LDESPSWGSRSVDCFEKLEQIGEGTYGQVYMARETETQEIVALKKIRMDNEREGFP 66
>12_02_0030 +
12469707-12469902,12470337-12470658,12472208-12472245,
12472486-12473573
Length = 547
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 211 YSPVDSSAQDNNKIKCKHAIVQYLLHTNTKSS 116
Y V+S+A +KC+HA ++ +HT +SS
Sbjct: 26 YRVVNSAANRRYTVKCEHARCKWKVHTTKRSS 57
>02_04_0116 +
19901546-19901737,19901825-19901899,19902034-19902115,
19902219-19902298,19903279-19903482,19903625-19903750,
19903872-19903985,19904802-19904918
Length = 329
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/102 (22%), Positives = 45/102 (44%)
Frame = +3
Query: 177 LLSCALLSTGEYLLPGDVVPTFYDVLLIYDVDPATNFSYFGRVDIKLNILKPTSKIVLHA 356
LL+ L+ +Y D + T + L D + G D+K ++ +K + +
Sbjct: 190 LLNLMLIHYSKYYGQSDTLKTTFSHLAWVQTDRKSG----GLGDLKYPLISDVTKSISKS 245
Query: 357 QGFSIPEEEVTLTGPKEVAVDNVKLNDTFNLLTLSLSQQLDE 482
G IP++ + L G + + V + T N L++ + +DE
Sbjct: 246 FGVLIPDQGIALRGLFIIDKEGVIQHSTIN--NLAIGRSVDE 285
>11_04_0274 -
15667178-15667444,15668352-15668678,15669430-15669563,
15669669-15669726,15669842-15669961,15670814-15670876,
15671388-15671539,15673002-15673116,15673907-15673981,
15674474-15674538,15675020-15675128
Length = 494
Score = 28.3 bits (60), Expect = 5.8
Identities = 31/103 (30%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Frame = +3
Query: 183 SCALLSTGEYLLPGDVVPTFYDVLLIYDVDPATNFSY-FGRVDIKLNILKPTSKIVLHAQ 359
+CAL S G L PG+ + TFY I P F + G V L PT +
Sbjct: 394 NCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPMGTVMYGL-ATSPTGDVSARRM 452
Query: 360 GFSIPEEEVTLTGPKEVAVDNVKLNDTFNLLTLSLSQQLDEGD 488
+P EV+ DNV + +T S SQQ+ G+
Sbjct: 453 LAPVPAH-------SEVSPDNV--SGRSRRITHSDSQQIPSGE 486
>04_01_0319 - 4291144-4293402
Length = 752
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 229 WCRHSTTCSSFTTWIRRRTSA 291
W RH C S TW+RR+ ++
Sbjct: 362 WIRHEVLCRSRWTWLRRQVAS 382
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,791,613
Number of Sequences: 37544
Number of extensions: 429416
Number of successful extensions: 1215
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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