Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9e22
(617 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC021136-1|AAH21136.1| 250|Homo sapiens interferon, gamma-induc... 105 1e-22
AF097362-1|AAF04618.1| 261|Homo sapiens gamma-interferon induci... 105 1e-22
AB049659-1|BAC98466.1| 250|Homo sapiens legumaturain protein. 105 1e-22
BC031020-1|AAH31020.1| 250|Homo sapiens interferon, gamma-induc... 105 2e-22
AK123477-1|BAC85622.1| 148|Homo sapiens protein ( Homo sapiens ... 81 3e-15
J03909-1|AAA36105.1| 303|Homo sapiens gamma-interferon-inducibl... 77 7e-14
AC007192-3|AAD22672.1| 101|Homo sapiens INIP_HUMAN [AA 4- 104] ... 33 1.1
U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein. 30 7.5
AY356402-1|AAR13653.1| 3222|Homo sapiens fat-like cadherin FATJ ... 30 7.5
AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG seven... 29 9.9
AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG seven... 29 9.9
AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG seven... 29 9.9
AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo ... 29 9.9
>BC021136-1|AAH21136.1| 250|Homo sapiens interferon,
gamma-inducible protein 30 protein.
Length = 250
Score = 105 bits (252), Expect = 1e-22
Identities = 49/154 (31%), Positives = 80/154 (51%)
Frame = +3
Query: 156 KKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWRDFRGLVKVKMVPYGKSTHDKVDGKWS 335
KK+ V + +YYE+LC + F+ +L P W ++ V +VPYG + V G+W
Sbjct: 55 KKSNAPLVNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWE 114
Query: 336 FICHHGADECYGNKVQACVLKDRNLQDTEKMEIVICLMNQTSPDKSLDTCLTQVDKMSES 515
F C HG +EC NKV+ACVL + +++ ++C+ ++SL CL
Sbjct: 115 FKCQHGEEECKFNKVEACVLDELDME--LAFLTIVCMEEFEDMERSLPLCLQLYAPGLSP 172
Query: 516 DKLKRCASSEQGDNLLASYGDKTDAVMRPLAFVP 617
D + CA ++G L+ + +TDA+ P +VP
Sbjct: 173 DTIMECAMGDRGMQLMHANAQRTDALQPPHEYVP 206
>AF097362-1|AAF04618.1| 261|Homo sapiens gamma-interferon inducible
lysosomal thiol reductase protein.
Length = 261
Score = 105 bits (252), Expect = 1e-22
Identities = 49/154 (31%), Positives = 80/154 (51%)
Frame = +3
Query: 156 KKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWRDFRGLVKVKMVPYGKSTHDKVDGKWS 335
KK+ V + +YYE+LC + F+ +L P W ++ V +VPYG + V G+W
Sbjct: 66 KKSNAPLVNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWE 125
Query: 336 FICHHGADECYGNKVQACVLKDRNLQDTEKMEIVICLMNQTSPDKSLDTCLTQVDKMSES 515
F C HG +EC NKV+ACVL + +++ ++C+ ++SL CL
Sbjct: 126 FKCQHGEEECKFNKVEACVLDELDME--LAFLTIVCMEEFEDMERSLPLCLQLYAPGLSP 183
Query: 516 DKLKRCASSEQGDNLLASYGDKTDAVMRPLAFVP 617
D + CA ++G L+ + +TDA+ P +VP
Sbjct: 184 DTIMECAMGDRGMQLMHANAQRTDALQPPHEYVP 217
>AB049659-1|BAC98466.1| 250|Homo sapiens legumaturain protein.
Length = 250
Score = 105 bits (252), Expect = 1e-22
Identities = 49/154 (31%), Positives = 80/154 (51%)
Frame = +3
Query: 156 KKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWRDFRGLVKVKMVPYGKSTHDKVDGKWS 335
KK+ V + +YYE+LC + F+ +L P W ++ V +VPYG + V G+W
Sbjct: 55 KKSNAPLVNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWE 114
Query: 336 FICHHGADECYGNKVQACVLKDRNLQDTEKMEIVICLMNQTSPDKSLDTCLTQVDKMSES 515
F C HG +EC NKV+ACVL + +++ ++C+ ++SL CL
Sbjct: 115 FKCQHGEEECKFNKVEACVLDELDME--LAFLTIVCMEEFEDMERSLPLCLQLYAPGLSP 172
Query: 516 DKLKRCASSEQGDNLLASYGDKTDAVMRPLAFVP 617
D + CA ++G L+ + +TDA+ P +VP
Sbjct: 173 DTIMECAMGDRGMQLMHANAQRTDALQPPHEYVP 206
>BC031020-1|AAH31020.1| 250|Homo sapiens interferon,
gamma-inducible protein 30 protein.
Length = 250
Score = 105 bits (251), Expect = 2e-22
Identities = 49/154 (31%), Positives = 80/154 (51%)
Frame = +3
Query: 156 KKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWRDFRGLVKVKMVPYGKSTHDKVDGKWS 335
KK+ V + +YYE+LC + F+ +L P W ++ V +VPYG + V G+W
Sbjct: 55 KKSNAPLVNVTLYYEALCGGCQAFLIRELFPTWLLVMEILNVTLVPYGNAQEQNVSGRWE 114
Query: 336 FICHHGADECYGNKVQACVLKDRNLQDTEKMEIVICLMNQTSPDKSLDTCLTQVDKMSES 515
F C HG +EC NKV+ACVL + +++ ++C+ ++SL CL
Sbjct: 115 FKCQHGEEECKFNKVEACVLDELDME--LAFLTIVCMEEFEDMERSLPLCLQLYAPGLSP 172
Query: 516 DKLKRCASSEQGDNLLASYGDKTDAVMRPLAFVP 617
D + CA ++G L+ + +TDA+ P +VP
Sbjct: 173 DTIMECAMGDRGMQLMHANAQRTDALQPPHEYVP 206
>AK123477-1|BAC85622.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ41483 fis, clone BRTHA2002808, highly similar
to GAMMA-INTERFERON-INDUCIBLE PROTEIN IP-30 PRECURSOR.
).
Length = 148
Score = 81.0 bits (191), Expect = 3e-15
Identities = 37/116 (31%), Positives = 61/116 (52%)
Frame = +3
Query: 270 LVKVKMVPYGKSTHDKVDGKWSFICHHGADECYGNKVQACVLKDRNLQDTEKMEIVICLM 449
++ V +VPYG + V G+W F C HG +EC NKV+ACVL + +++ ++C+
Sbjct: 3 ILNVTLVPYGNAQEQNVSGRWEFKCQHGEEECKFNKVEACVLDELDME--LAFLTIVCME 60
Query: 450 NQTSPDKSLDTCLTQVDKMSESDKLKRCASSEQGDNLLASYGDKTDAVMRPLAFVP 617
++SL CL D + CA ++G L+ + +TDA+ P +VP
Sbjct: 61 EFEDMERSLPLCLQLYAPGLSPDTIMECAMGDRGMQLMHANAQRTDALQPPHEYVP 116
>J03909-1|AAA36105.1| 303|Homo sapiens gamma-interferon-inducible
protein precursor protein.
Length = 303
Score = 76.6 bits (180), Expect = 7e-14
Identities = 32/86 (37%), Positives = 49/86 (56%)
Frame = +3
Query: 156 KKTEDHKVKIAVYYESLCPDSKKFITTQLAPVWRDFRGLVKVKMVPYGKSTHDKVDGKWS 335
KK+ V + +YYE+LC + F+ +L P W ++ V VPYG + V G+W
Sbjct: 66 KKSNAPLVNVTLYYEALCGGCRAFLIRELFPTWLLVMEILNVTSVPYGNAQEQNVSGRWE 125
Query: 336 FICHHGADECYGNKVQACVLKDRNLQ 413
F C G +EC NKV+ACVL + +++
Sbjct: 126 FKCQLGEEECKFNKVEACVLDELDME 151
>AC007192-3|AAD22672.1| 101|Homo sapiens INIP_HUMAN [AA 4- 104]
protein.
Length = 101
Score = 32.7 bits (71), Expect = 1.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 156 KKTEDHKVKIAVYYESLCPDSKKFITTQLAPVW 254
KK+ V + +YYE+LC + F+ +L P W
Sbjct: 63 KKSNAPLVNVTLYYEALCGGCRAFLIRELFPTW 95
>U49974-1|AAC52011.1| 351|Homo sapiens mariner transposase protein.
Length = 351
Score = 29.9 bits (64), Expect = 7.5
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 235 RNWLPSGGTSEDLSKSKWSRMGRARTTRWMGNG 333
+ WLP GG+ +K+ WSR T W G
Sbjct: 176 KQWLPRGGSGPVKAKADWSRAKVMATVFWDAQG 208
>AY356402-1|AAR13653.1| 3222|Homo sapiens fat-like cadherin FATJ
protein protein.
Length = 3222
Score = 29.9 bits (64), Expect = 7.5
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 290 DHFDFDKSSEVPP-DGSQLRRYKLFAVRTKGFVIDRY 183
+H+D D +S + P D ++ YK F T F I R+
Sbjct: 2859 EHYDIDNASSIAPSDADIIQHYKQFRSHTPKFSIQRH 2895
>AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
G-type receptor 1 (flamingo homolog, Drosophila) protein.
Length = 3014
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +2
Query: 380 ASLRPEG-PQPPGHGEDGDCNMPHEPDQPRQVFGHVLNSSRQDVGVG*TEK 529
ASL P PPGH D D + + H +S +D GVG EK
Sbjct: 2790 ASLMPRSCKDPPGHDSDSDSELSLDEQSSSYASSH--SSDSEDDGVGAEEK 2838
>AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
G-type receptor 1 (flamingo homolog, Drosophila) protein.
Length = 3014
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +2
Query: 380 ASLRPEG-PQPPGHGEDGDCNMPHEPDQPRQVFGHVLNSSRQDVGVG*TEK 529
ASL P PPGH D D + + H +S +D GVG EK
Sbjct: 2790 ASLMPRSCKDPPGHDSDSDSELSLDEQSSSYASSH--SSDSEDDGVGAEEK 2838
>AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
G-type receptor 1 (flamingo homolog, Drosophila) protein.
Length = 3014
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +2
Query: 380 ASLRPEG-PQPPGHGEDGDCNMPHEPDQPRQVFGHVLNSSRQDVGVG*TEK 529
ASL P PPGH D D + + H +S +D GVG EK
Sbjct: 2790 ASLMPRSCKDPPGHDSDSDSELSLDEQSSSYASSH--SSDSEDDGVGAEEK 2838
>AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo 2
protein.
Length = 3014
Score = 29.5 bits (63), Expect = 9.9
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +2
Query: 380 ASLRPEG-PQPPGHGEDGDCNMPHEPDQPRQVFGHVLNSSRQDVGVG*TEK 529
ASL P PPGH D D + + H +S +D GVG EK
Sbjct: 2790 ASLMPRSCKDPPGHDSDSDSELSLDEQSSSYASSH--SSDSEDDGVGAEEK 2838
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,071,405
Number of Sequences: 237096
Number of extensions: 2039561
Number of successful extensions: 5453
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5420
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -