Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9e19
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.54 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    24   0.95 
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    23   2.9  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    23   2.9  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   3.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   3.8  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   5.1  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   5.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   6.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 379  LNGFNEKQTMMYDRLINSPS 438
            L G+N+ Q   Y RL+N+P+
Sbjct: 1475 LGGWNDSQGDKYSRLVNNPA 1494



 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 379  LNGFNEKQTMMYDRLINSPS 438
            + G+N+     Y RL+N+PS
Sbjct: 1900 IGGWNDSAGDKYSRLVNNPS 1919



 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 379  LNGFNEKQTMMYDRLINSP 435
            L G+N+     Y RL+N P
Sbjct: 2398 LGGWNDSAGNKYSRLVNDP 2416


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 443 SLLGEFMRRSYIIVCFSLKPFKYFFAKVLSRRSFSNIPL 327
           +LL E + +SY     +LK F     K+L++ SF  I L
Sbjct: 50  ALLQEIIPKSYFGTTTNLKRFYKVVEKILTQSSFECIHL 88


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 493 FDNEIMNLLKKHAKNEDKIALR 558
           FDN +  LLKK   NE+   LR
Sbjct: 40  FDNYLQCLLKKGKCNEEAAILR 61


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 493 FDNEIMNLLKKHAKNEDKIALR 558
           FDN +  LLKK   NE+   LR
Sbjct: 40  FDNYLQCLLKKGKCNEEAAILR 61


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 154 TRTLNLSYNALKNVQKVAFSSNTTNNMDTTYMEIPLYD 267
           T T   + +AL +   + F+ +T+N + T    I LY+
Sbjct: 11  TTTTTTTSSALNSTPLIEFNISTSNYLYTPSSTIDLYN 48



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/40 (25%), Positives = 22/40 (55%)
 Frame = -3

Query: 477 LLFNYPIEYVPIVAG*VYETIVHHSLFFIKTIQILLRKSA 358
           + F +P+  + IV   + +T++HH +    T  ++  +SA
Sbjct: 244 IFFIFPLAILIIVYILIAKTLMHHPVAMTGTKTVMPSQSA 283


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 154 TRTLNLSYNALKNVQKVAFSSNTTNNMDTTYMEIPLYD 267
           T T   + +AL +   + F+ +T+N + T    I LY+
Sbjct: 11  TTTTTTTSSALNSTPLIEFNISTSNYLYTPSSTIDLYN 48


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = -1

Query: 470 STIQ*NMSQSLLGEFMRRSYIIVCFSLKPFKYFFAKVL 357
           S +Q  ++Q++   F+  + I VC ++  F+YF  K+L
Sbjct: 178 SLVQLILTQAIFLMFVSYN-IYVCQTVSNFEYFQRKIL 214


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = -1

Query: 470 STIQ*NMSQSLLGEFMRRSYIIVCFSLKPFKYFFAKVL 357
           S +Q  ++Q++   F+  + I VC ++  F+YF  K+L
Sbjct: 104 SLVQLILTQAIFLMFVSYN-IYVCQTVSNFEYFQRKIL 140


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -1

Query: 437 LGEFMRRSYIIVCFSLKPFKYF 372
           +GE  + +  +VCF+ KP+  +
Sbjct: 303 VGEGWQNTDFVVCFNAKPWSNY 324


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 14   VKKGGRGFLLKNDHLYLFDLISKPFYSND 100
            V+KG   FL   + L+  DL+ K  Y  D
Sbjct: 1220 VRKGEVEFLSSTEILFWKDLLDKYLYPID 1248


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 14   VKKGGRGFLLKNDHLYLFDLISKPFYSND 100
            V+KG   FL   + L+  DL+ K  Y  D
Sbjct: 1220 VRKGEVEFLSSTEILFWKDLLDKYLYPID 1248


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 14   VKKGGRGFLLKNDHLYLFDLISKPFYSND 100
            V+KG   FL   + L+  DL+ K  Y  D
Sbjct: 1220 VRKGEVEFLSSTEILFWKDLLDKYLYPID 1248


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 14   VKKGGRGFLLKNDHLYLFDLISKPFYSND 100
            V+KG   FL   + L+  DL+ K  Y  D
Sbjct: 1220 VRKGEVEFLSSTEILFWKDLLDKYLYPID 1248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,975
Number of Sequences: 336
Number of extensions: 3505
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)