Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9e18
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    25   0.38 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   3.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   3.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   3.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   8.3  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.3  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 347 HASRHGGRAAPVPEPSDRLRPQPRARGPSSSL 442
           H  +H G A  VP+    ++P P +  PS  L
Sbjct: 25  HQHQHYGAAVQVPQGGGAVQPDPGSCDPSVGL 56


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 291 EVTPMPSQPITNTMVDPCYTPAGMAAEPLRFP 386
           +VTP+PS   T+   DP   P      PL  P
Sbjct: 68  QVTPLPSDGTTSPEPDP-EIPVAPEPAPLASP 98


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 82  FNLNLSKFQLYFIKLTIRKWLR 147
           F LN+S   +YF  L+   W R
Sbjct: 574 FFLNVSSIPIYFKWLSFLSWFR 595


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 82  FNLNLSKFQLYFIKLTIRKWLR 147
           F LN+S   +YF  L+   W R
Sbjct: 574 FFLNVSSIPIYFKWLSFLSWFR 595


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +2

Query: 140 G*GRDNVHATSTMESSKGDSR 202
           G GRD  H  STM SS    R
Sbjct: 255 GEGRDGSHRFSTMVSSANRRR 275


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 82  FNLNLSKFQLYFIKLTIRKWLRKRQ 156
           +N+  SKF+  F KL   K ++KR+
Sbjct: 353 YNIISSKFRSGFFKLCGMKIVKKRR 377


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 215 PATSGLLFPFTKKTPLETYN 274
           PAT+G+  PFT+   +  +N
Sbjct: 266 PATTGIAGPFTQSPGVLGFN 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,489
Number of Sequences: 336
Number of extensions: 3322
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)