Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9e16
(652 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0314 - 17600970-17600974,17601230-17601357,17601832-176019... 36 0.037
10_01_0007 - 79867-79950,80258-80303,80409-80641,80765-80836,811... 29 3.2
01_06_0588 - 30440817-30441203,30441323-30441463,30441598-30442404 29 4.2
12_01_0878 - 8420348-8420580,8420728-8420890 28 5.6
07_03_0828 + 21789849-21790259,21790319-21790951,21791635-21792159 28 5.6
05_07_0240 + 28606345-28607316 28 5.6
01_01_0407 - 3067071-3070085 28 5.6
09_03_0139 + 12692844-12694982 28 7.4
08_02_0205 - 14280797-14280872,14281669-14281973 27 9.8
07_03_1620 - 28180020-28180862 27 9.8
07_03_0842 - 21952483-21954135,21957361-21958108,21958266-21958534 27 9.8
02_05_0237 + 27095817-27097433 27 9.8
02_01_0579 - 4293528-4294117,4294561-4294762,4296145-4296348,429... 27 9.8
>02_03_0314 -
17600970-17600974,17601230-17601357,17601832-17601924,
17602145-17602257,17602520-17602627,17602724-17602828,
17603185-17603355,17603474-17603652,17603741-17603969,
17604841-17604955,17605137-17605312,17606060-17606143,
17606463-17606630,17607011-17607097,17607201-17607323
Length = 627
Score = 35.5 bits (78), Expect = 0.037
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +1
Query: 97 VEGYKVFQDQIDKLTDAQTLIITKFDNLMANMNELREVLGGISDKIVLLEEGATDRRKLK 276
+E + +DQ +L D K D L M ELR + G+ DKI E+ D R+L+
Sbjct: 239 LENLQTLKDQAYRLRDNIAQDQEKSDALKIQMEELRTNVQGVEDKIRRTEKSLADLRRLQ 298
Query: 277 ADI 285
+I
Sbjct: 299 QEI 301
>10_01_0007 -
79867-79950,80258-80303,80409-80641,80765-80836,
81135-81230,81506-81607,81684-82349
Length = 432
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 536 PLAEHTIRAPSNLNTAHSVGVVSD 465
P+ +H APS + AH +G++SD
Sbjct: 229 PVTDHNFDAPSKIPFAHGMGLISD 252
>01_06_0588 - 30440817-30441203,30441323-30441463,30441598-30442404
Length = 444
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = -2
Query: 372 FDILDIGRTGVLAVFDYSVQIIDPSLQDLNVCLQFTSIG 256
FD ++IG++ V D+ ++ + PSL+ L + L +TS G
Sbjct: 258 FDTIEIGQS-VFTEDDFDIKTLMPSLKTLAIELSYTSEG 295
>12_01_0878 - 8420348-8420580,8420728-8420890
Length = 131
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Frame = +1
Query: 379 HSGFSNSSKVTMTTGLD-----RETIRAAYED-VRSDTTPTEWAVFKFEGARIVCSARGS 540
H+G +N+ + + T ++ ET R D + S TT EW ++ GA ++
Sbjct: 21 HAGVANTVRARLGTTMNLKPMSEETSREGLRDGLGSWTTGLEWRQWQLRGAAVMLEVEEE 80
Query: 541 DFTEFRTQFSDDE 579
D DDE
Sbjct: 81 DLERLTMTSVDDE 93
>07_03_0828 + 21789849-21790259,21790319-21790951,21791635-21792159
Length = 522
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +1
Query: 97 VEGYKVFQDQIDKLTDAQTLI---ITKFDNLMANMNELREVLGGISDKIVLLEE 249
VE Y+ F D +D L +TL+ I +F + +M L + +V++ E
Sbjct: 350 VEAYRTFMDDMDNLPKCETLVVALIAQFHGFVPSMLHLLRRCSHVKKLVVMIIE 403
>05_07_0240 + 28606345-28607316
Length = 323
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -2
Query: 588 ECAFIIRELRAELREVATPGRAHYPGAFKLEHRP 487
E A I+ LRA +AT AH P AF+ HRP
Sbjct: 73 EVAAAIQHLRAADPALATVIDAHDPPAFQCPHRP 106
>01_01_0407 - 3067071-3070085
Length = 1004
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 112 VFQDQIDKLTDAQTLIITKFDNLMANMNELREVLGGISDKIVLLEEGA 255
V+ +++ DAQ L + ++L+AN++ LRE+ G+ + L E GA
Sbjct: 174 VYVFKMNSSLDAQQLAVPNLESLVANLSNLRELNLGL---VNLSENGA 218
>09_03_0139 + 12692844-12694982
Length = 712
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 479 RPSGRCSSLKAPG*CARPGVATSRSSARSSLMMNAHS 589
+PSG + L PG AR A + SSA SS HS
Sbjct: 596 QPSGAAAVLSQPGLVARLAEALAASSASSSRSARDHS 632
>08_02_0205 - 14280797-14280872,14281669-14281973
Length = 126
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 263 LSVAPSSSKTILSEIPPRTS 204
LS+APS+S + E+PPR S
Sbjct: 10 LSLAPSASGCVAEELPPRAS 29
>07_03_1620 - 28180020-28180862
Length = 280
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 73 MASPFADHVEGYKVFQDQIDKLTDAQTLIITKFDNLMANMN 195
M +P ADH +DQ+D + +A + + N AN N
Sbjct: 182 MRTPDADHHPRVSAMRDQLDLIEEAMRNRLRLYSNANANAN 222
>07_03_0842 - 21952483-21954135,21957361-21958108,21958266-21958534
Length = 889
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +1
Query: 256 TDRRKLKADIQVLKTRIDDLYAIVKDGKDS 345
+DRR+++ + + K RID L++ ++ D+
Sbjct: 266 SDRRRVRREYEEFKVRIDSLFSTIRKRSDA 295
>02_05_0237 + 27095817-27097433
Length = 538
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = -3
Query: 317 YKSSILVFRT*MSAFSLRLSVAPSSSKTILSEIPPRTSRNSFMFAIKLSNLVMISVWASV 138
Y + +L+ T SA V+ ILS +PPR +R F S IS WA+V
Sbjct: 234 YSAPVLIVLT--SALLAWAYVSAGGFGRILS-LPPRLTRAEFWKVFFPSLTANISFWATV 290
Query: 137 SLSI 126
+++I
Sbjct: 291 AINI 294
>02_01_0579 -
4293528-4294117,4294561-4294762,4296145-4296348,
4296425-4296585,4296665-4297158,4297526-4297584,
4297766-4297841,4298511-4298552,4298757-4298860,
4299071-4299280
Length = 713
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 184 ANMNELREVLGGISDKIVLLEEGATDRRKLKADIQVLKTRIDDLYAIVKDGK 339
A N + G IS + E D +KL AD V K + +YAI DGK
Sbjct: 422 AIFNNIYAFCGLISGEQFYSSESLDDSQKLFADALVKKAYDNWMYAIEYDGK 473
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,998,833
Number of Sequences: 37544
Number of extensions: 382669
Number of successful extensions: 1107
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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