Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9e13
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   4.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.1  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
 Frame = +3

Query: 249 EFVKEWGFQLVKSSPYYARSNGMV----ERHIQIVKKMFKKCD 365
           EFVK WGF        Y    G        ++ ++K+M K+ D
Sbjct: 127 EFVKTWGFDGFDLDWEYPGQRGGAYNDKSNYVTLIKEMRKEFD 169


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 6/32 (18%), Positives = 19/32 (59%)
 Frame = +3

Query: 90  VVDYLTKYVEIINMVDQSTQSHILALKQMFAR 185
           V +++  Y++ + +  ++   H+  L+Q+F +
Sbjct: 450 VREFVVNYIDDLLVASETLNEHLEHLRQVFEK 481


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 72  FYRRTYQLLLYPRVVSVCPLE 10
           FY+ T  LL+  +++ V P+E
Sbjct: 49  FYQTTKSLLVLFQIMGVMPIE 69


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 72  FYRRTYQLLLYPRVVSVCPLE 10
           FY+ T  LL+  +++ V P+E
Sbjct: 49  FYQTTKSLLVLFQIMGVMPIE 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,556
Number of Sequences: 336
Number of extensions: 3641
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)