Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9e13
(670 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenou... 44 7e-04
AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein. 44 7e-04
AF298588-1|AAK11554.1| 956|Homo sapiens polymerase protein. 44 7e-04
AF298587-1|AAK11553.1| 956|Homo sapiens polymerase protein. 44 7e-04
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 44 7e-04
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 44 7e-04
AF074086-7|AAD21097.1| 956|Homo sapiens polymerase protein. 44 7e-04
AF074086-3|AAF88167.1| 956|Homo sapiens polymerase protein. 44 7e-04
AF480924-3|AAM81188.1| 863|Homo sapiens pol protein protein. 43 9e-04
AF333072-2|AAL60056.1| 702|Homo sapiens pol protein protein. 43 9e-04
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 42 0.003
AK131330-1|BAD18490.1| 153|Homo sapiens protein ( Homo sapiens ... 40 0.008
X58677-1|CAA41528.1| 608|Homo sapiens hemidesmosomal plaque pr... 34 0.53
M63618-1|AAA35606.1| 2095|Homo sapiens bullous pemphigoid antige... 34 0.53
L11690-1|AAA52288.1| 2649|Homo sapiens bullous pemphigoid antige... 34 0.53
BC033390-1|AAH33390.1| 439|Homo sapiens KRBA2 protein protein. 34 0.53
AL096710-6|CAI22047.1| 2649|Homo sapiens dystonin protein. 34 0.53
AK131219-1|BAD18406.1| 492|Homo sapiens protein ( Homo sapiens ... 34 0.53
AB037726-1|BAA92543.2| 1819|Homo sapiens KIAA1305 protein protein. 31 3.7
>M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenous
retrovirus HERV-K10. ).
Length = 1361
Score = 43.6 bits (98), Expect = 7e-04
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +3
Query: 87 MVVDYLTKYVEIINMVDQSTQSHILA-LKQMFARWGIPTKLCTDDASQFNSYEFQEFVKE 263
+ VD + ++ +ST SH+ L FA G+P K+ TD+ + S FQ+F+ +
Sbjct: 570 VTVDTYSHFIWATCQTGEST-SHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQ 628
Query: 264 WGFQLVKSSPYYARSNGMVERHIQIVKKMFKK 359
W PY ++ +VER + +K K
Sbjct: 629 WKISHTTGIPYNSQGQAIVERTNRTLKTQLVK 660
>AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein.
Length = 727
Score = 43.6 bits (98), Expect = 7e-04
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +3
Query: 87 MVVDYLTKYVEIINMVDQSTQSHILA-LKQMFARWGIPTKLCTDDASQFNSYEFQEFVKE 263
+ VD + ++ +ST SH+ L FA G+P K+ TD+ + S FQ+F+ +
Sbjct: 531 VTVDTYSHFIWATCQTGEST-SHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQ 589
Query: 264 WGFQLVKSSPYYARSNGMVERHIQIVKKMFKK 359
W PY ++ +VER + +K K
Sbjct: 590 WKISHTTGIPYNSQGQAIVERTNRTLKTQLVK 621
>AF298588-1|AAK11554.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 43.6 bits (98), Expect = 7e-04
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +3
Query: 87 MVVDYLTKYVEIINMVDQSTQSHILA-LKQMFARWGIPTKLCTDDASQFNSYEFQEFVKE 263
+ VD + ++ +ST SH+ L FA G+P K+ TD+ + S FQ+F+ +
Sbjct: 668 VTVDTYSHFIWATCQTGEST-SHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQ 726
Query: 264 WGFQLVKSSPYYARSNGMVERHIQIVKKMFKK 359
W PY ++ +VER + +K K
Sbjct: 727 WKISHTTGIPYNSQGQAIVERTNRTLKTQLVK 758
>AF298587-1|AAK11553.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 43.6 bits (98), Expect = 7e-04
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +3
Query: 87 MVVDYLTKYVEIINMVDQSTQSHILA-LKQMFARWGIPTKLCTDDASQFNSYEFQEFVKE 263
+ VD + ++ +ST SH+ L FA G+P K+ TD+ + S FQ+F+ +
Sbjct: 668 VTVDTYSHFIWATCQTGEST-SHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQ 726
Query: 264 WGFQLVKSSPYYARSNGMVERHIQIVKKMFKK 359
W PY ++ +VER + +K K
Sbjct: 727 WKISHTTGIPYNSQGQAIVERTNRTLKTQLVK 758
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1879
Score = 43.6 bits (98), Expect = 7e-04
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +3
Query: 87 MVVDYLTKYVEIINMVDQSTQSHILA-LKQMFARWGIPTKLCTDDASQFNSYEFQEFVKE 263
+ VD + ++ +ST SH+ L FA G+P K+ TD+ + S FQ+F+ +
Sbjct: 1591 VTVDTYSHFIWATCQTGEST-SHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQ 1649
Query: 264 WGFQLVKSSPYYARSNGMVERHIQIVKKMFKK 359
W PY ++ +VER + +K K
Sbjct: 1650 WKISHTTGIPYNSQGQAIVERTNRTLKTQLVK 1681
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 43.6 bits (98), Expect = 7e-04
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +3
Query: 87 MVVDYLTKYVEIINMVDQSTQSHILA-LKQMFARWGIPTKLCTDDASQFNSYEFQEFVKE 263
+ VD + ++ +ST SH+ L FA G+P K+ TD+ + S FQ+F+ +
Sbjct: 1591 VTVDTYSHFIWATCQTGEST-SHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQ 1649
Query: 264 WGFQLVKSSPYYARSNGMVERHIQIVKKMFKK 359
W PY ++ +VER + +K K
Sbjct: 1650 WKISHTTGIPYNSQGQAIVERTNRTLKTQLVK 1681
>AF074086-7|AAD21097.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 43.6 bits (98), Expect = 7e-04
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +3
Query: 87 MVVDYLTKYVEIINMVDQSTQSHILA-LKQMFARWGIPTKLCTDDASQFNSYEFQEFVKE 263
+ VD + ++ +ST SH+ L FA G+P K+ TD+ + S FQ+F+ +
Sbjct: 668 VTVDTYSHFIWATCQTGEST-SHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQ 726
Query: 264 WGFQLVKSSPYYARSNGMVERHIQIVKKMFKK 359
W PY ++ +VER + +K K
Sbjct: 727 WKISHTTGIPYNSQGQAIVERTNRTLKTQLVK 758
>AF074086-3|AAF88167.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 43.6 bits (98), Expect = 7e-04
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +3
Query: 87 MVVDYLTKYVEIINMVDQSTQSHILA-LKQMFARWGIPTKLCTDDASQFNSYEFQEFVKE 263
+ VD + ++ +ST SH+ L FA G+P K+ TD+ + S FQ+F+ +
Sbjct: 668 VTVDTYSHFIWATCQTGEST-SHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQ 726
Query: 264 WGFQLVKSSPYYARSNGMVERHIQIVKKMFKK 359
W PY ++ +VER + +K K
Sbjct: 727 WKISHTTGIPYNSQGQAIVERTNRTLKTQLVK 758
>AF480924-3|AAM81188.1| 863|Homo sapiens pol protein protein.
Length = 863
Score = 43.2 bits (97), Expect = 9e-04
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Frame = +3
Query: 63 FYKNNIYLMVVDYLTKYVEIINMVDQSTQSHILALKQMFARWGIPTKLCTDDASQFNSYE 242
F + + + VD + V M + Q I Q FA WG+P + D++S + S
Sbjct: 656 FGRQSCVHVTVDTYSGVVMATAMNKEGVQQVIQHCLQAFAAWGVPHVIKMDNSSAYTSTR 715
Query: 243 FQEFVKEWGFQLVKSSPYYARSNGMV-ERHIQIVKKMFKK 359
F F+KE+ + S PY + +V H+ + + K+
Sbjct: 716 FAAFLKEFRISHITSIPYNPQGQAVVGHTHLYLKNLIIKQ 755
>AF333072-2|AAL60056.1| 702|Homo sapiens pol protein protein.
Length = 702
Score = 43.2 bits (97), Expect = 9e-04
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +3
Query: 63 FYKNNIYLMVVDYLTKYVEIINMVDQSTQSHILA-LKQMFARWGIPTKLCTDDASQFNSY 239
F K + + VD + ++ +ST SH+ L FA G+P K+ TD+ + S
Sbjct: 550 FGKLSYVHVTVDTYSHFMWATCQTGEST-SHVKKHLLSCFAVMGVPKKIKTDNGPGYCSK 608
Query: 240 EFQEFVKEWGFQLVKSSPYYARSNGMVERHIQIVKKMFKK 359
FQ+F+ +W PY ++ +VER + +K K
Sbjct: 609 AFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVK 648
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1755
Score = 41.5 bits (93), Expect = 0.003
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 150 SHILA-LKQMFARWGIPTKLCTDDASQFNSYEFQEFVKEWGFQLVKSSPYYARSNGMVER 326
SH+ L FA G+P K+ TD+ + S FQ+F+ +W PY ++ +VER
Sbjct: 1613 SHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVER 1672
Query: 327 HIQIVKKMFKK 359
+ +K K
Sbjct: 1673 TNRTLKTQLVK 1683
>AK131330-1|BAD18490.1| 153|Homo sapiens protein ( Homo sapiens
cDNA FLJ16337 fis, clone TESTI1000266. ).
Length = 153
Score = 39.9 bits (89), Expect = 0.008
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +3
Query: 177 FARWGIPTKLCTDDASQFNSYEFQEFVKEWGFQLVKSSPYYARSNGMVERHIQIVKKMFK 356
FA G PTK+ T++ + S +FQ+F W Q PY + +VE +K M K
Sbjct: 68 FAFMGQPTKIKTNNDLAYASSQFQQFCHMWNIQHSTGIPYNPQGQAIVECAHSTLKNMLK 127
Query: 357 K 359
K
Sbjct: 128 K 128
>X58677-1|CAA41528.1| 608|Homo sapiens hemidesmosomal plaque
protein protein.
Length = 608
Score = 33.9 bits (74), Expect = 0.53
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = +3
Query: 336 IVKKMFKKCDFDQKDIYMALMEYRNTPIDSEINMSPNELLLGRQTVTLLPTRSSLPGKNK 515
+V + +KCD I E RN +++E+N S E G Q V L + N+
Sbjct: 65 LVSEFKQKCDQQNIIIQNTKKEVRN--LNAELNASKEEKRRGEQKVQLQQAQVQ-ELNNR 121
Query: 516 LKKVRNSLQKKQIKYKYYH 572
LKKV++ L K I+ + H
Sbjct: 122 LKKVQDELHLKTIEEQMTH 140
>M63618-1|AAA35606.1| 2095|Homo sapiens bullous pemphigoid antigen
protein.
Length = 2095
Score = 33.9 bits (74), Expect = 0.53
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = +3
Query: 336 IVKKMFKKCDFDQKDIYMALMEYRNTPIDSEINMSPNELLLGRQTVTLLPTRSSLPGKNK 515
+V + +KCD I E RN +++E+N S E G Q V L + N+
Sbjct: 1105 LVSEFKQKCDQQNIIIQNTKKEVRN--LNAELNASKEEKRRGEQKVQLQQAQVQ-ELNNR 1161
Query: 516 LKKVRNSLQKKQIKYKYYH 572
LKKV++ L K I+ + H
Sbjct: 1162 LKKVQDELHLKTIEEQMTH 1180
>L11690-1|AAA52288.1| 2649|Homo sapiens bullous pemphigoid antigen
protein.
Length = 2649
Score = 33.9 bits (74), Expect = 0.53
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = +3
Query: 336 IVKKMFKKCDFDQKDIYMALMEYRNTPIDSEINMSPNELLLGRQTVTLLPTRSSLPGKNK 515
+V + +KCD I E RN +++E+N S E G Q V L + N+
Sbjct: 1659 LVSEFKQKCDQQNIIIQNTKKEVRN--LNAELNASKEEKRRGEQKVQLQQAQVQ-ELNNR 1715
Query: 516 LKKVRNSLQKKQIKYKYYH 572
LKKV++ L K I+ + H
Sbjct: 1716 LKKVQDELHLKTIEEQMTH 1734
>BC033390-1|AAH33390.1| 439|Homo sapiens KRBA2 protein protein.
Length = 439
Score = 33.9 bits (74), Expect = 0.53
Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 6/128 (4%)
Frame = +3
Query: 96 DYLTKYVEIINMVDQSTQSHILALKQMFARWGIPTKLCTDDASQFNSYEFQEFVKEWGFQ 275
D+ TK++ + + + + L +F G P+ L +D +F + E + W
Sbjct: 233 DHSTKFIILRPLRTKQAHEVVSVLLDIFTILGTPSVLDSDSGVEFTNQVVHELNELWPDL 292
Query: 276 LVKSSPYY-ARSNGMVERHIQIVKKMFKKCDFDQKDIYMA-----LMEYRNTPIDSEINM 437
+ S Y+ +S G +E + VK M + A + RN D +
Sbjct: 293 KIVSGKYHPGQSQGSLEGASRDVKNMISTWMQSNHSCHWAKGLRFMQMVRNQAFDVSLQQ 352
Query: 438 SPNELLLG 461
SP E + G
Sbjct: 353 SPFEAMFG 360
>AL096710-6|CAI22047.1| 2649|Homo sapiens dystonin protein.
Length = 2649
Score = 33.9 bits (74), Expect = 0.53
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = +3
Query: 336 IVKKMFKKCDFDQKDIYMALMEYRNTPIDSEINMSPNELLLGRQTVTLLPTRSSLPGKNK 515
+V + +KCD I E RN +++E+N S E G Q V L + N+
Sbjct: 1659 LVSEFKQKCDQQNIIIQNTKKEVRN--LNAELNASKEEKRRGEQKVQLQQAQVQ-ELNNR 1715
Query: 516 LKKVRNSLQKKQIKYKYYH 572
LKKV++ L K I+ + H
Sbjct: 1716 LKKVQDELHLKTIEEQMTH 1734
>AK131219-1|BAD18406.1| 492|Homo sapiens protein ( Homo sapiens
cDNA FLJ16113 fis, clone 3NB692004724. ).
Length = 492
Score = 33.9 bits (74), Expect = 0.53
Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 6/128 (4%)
Frame = +3
Query: 96 DYLTKYVEIINMVDQSTQSHILALKQMFARWGIPTKLCTDDASQFNSYEFQEFVKEWGFQ 275
D+ TK++ + + + + L +F G P+ L +D +F + E + W
Sbjct: 286 DHSTKFIILRPLRTKQAHEVVSVLLDIFTILGTPSVLDSDSGVEFTNQVVHELNELWPDL 345
Query: 276 LVKSSPYY-ARSNGMVERHIQIVKKMFKKCDFDQKDIYMA-----LMEYRNTPIDSEINM 437
+ S Y+ +S G +E + VK M + A + RN D +
Sbjct: 346 KIVSGKYHPGQSQGSLEGASRDVKNMISTWMQSNHSCHWAKGLRFMQMVRNQAFDVSLQQ 405
Query: 438 SPNELLLG 461
SP E + G
Sbjct: 406 SPFEAMFG 413
>AB037726-1|BAA92543.2| 1819|Homo sapiens KIAA1305 protein protein.
Length = 1819
Score = 31.1 bits (67), Expect = 3.7
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 84 LMVVDYLTKYVEIINMVDQS-TQSHILALKQMFARWGIPTKLCTDDASQF 230
L+V D T++VE + + T + L+ +FARWG+P +L QF
Sbjct: 1557 LIVADPNTRWVEAFPLKPYTHTAVAQVLLQHVFARWGVPVRLEAAQGPQF 1606
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,841,657
Number of Sequences: 237096
Number of extensions: 1819473
Number of successful extensions: 2714
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2714
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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