Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9e13
(670 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 64 2e-10
AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p pro... 62 9e-10
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 61 2e-09
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 58 1e-08
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 57 2e-08
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 53 4e-07
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 48 1e-05
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 46 6e-05
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 45 8e-05
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 45 8e-05
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 45 8e-05
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 45 8e-05
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 45 8e-05
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 45 8e-05
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 45 1e-04
AJ279888-1|CAB69645.1| 120|Drosophila melanogaster integrase pr... 43 4e-04
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 42 8e-04
AY058502-1|AAL13731.1| 280|Drosophila melanogaster LD21171p pro... 42 8e-04
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 36 0.038
AE013599-2588|AAM68478.1| 614|Drosophila melanogaster CG30110-P... 33 0.27
X15707-1|CAA33737.1| 267|Drosophila melanogaster protein ( Dros... 31 1.4
AY051871-1|AAK93295.1| 551|Drosophila melanogaster LD36546p pro... 29 7.6
AF145306-1|AAF08387.1| 413|Drosophila melanogaster 26S proteaso... 29 7.6
AE014298-1555|AAF48001.1| 413|Drosophila melanogaster CG16916-P... 29 7.6
AE014297-2121|AAF55255.2| 374|Drosophila melanogaster CG8884-PB... 29 7.6
AE014297-2119|AAN13686.1| 551|Drosophila melanogaster CG8884-PH... 29 7.6
AE014297-2118|AAN13685.1| 551|Drosophila melanogaster CG8884-PE... 29 7.6
AE014297-2117|AAN13684.1| 551|Drosophila melanogaster CG8884-PD... 29 7.6
AE014297-2116|AAN13683.1| 551|Drosophila melanogaster CG8884-PC... 29 7.6
AE014297-2115|AAN13682.1| 551|Drosophila melanogaster CG8884-PA... 29 7.6
AE014296-3423|AAF51643.2| 1959|Drosophila melanogaster CG11451-P... 28 10.0
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 63.7 bits (148), Expect = 2e-10
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 12/207 (5%)
Frame = +3
Query: 18 DIPKQPWDIIGADMFFYKNNIYLMVVDYLTKYVEIINMVDQSTQSHILALKQMFARWGIP 197
+ P +P DII D++ NN L ++D +K+ + + +++ + I A+K F+++G+P
Sbjct: 921 ETPSKPLDIIHIDIYTINNNFNLTIIDKFSKFAAVYPIPNRNGINCIKAIKNFFSQFGLP 980
Query: 198 TKLCTDDASQFNSYEFQEFVKEWGFQLVKSSPYYARSNGMVERHIQIVKKMFK------- 356
KL D +F + F++F ++ L +S + SN VER + ++++
Sbjct: 981 KKLIHDQGVEFCNDIFRKFCSQYNILLHVTSFQQSSSNSPVERLHSSLTEIYRIILDTRK 1040
Query: 357 --KCDFDQKDIYMALMEYRNTPIDSEINMSPNELLLGRQTV---TLLPTRSSLPGKNKLK 521
K D ++I + N I S +P EL GR + T++P NKL
Sbjct: 1041 KHKLPTDHEEIMSETVITYNNAIHSTTKHTPFELFNGRTHLFEKTIIPNNEH-DYLNKLN 1099
Query: 522 KVRNSLQKKQIKYKYYHDRRNNQKGIE 602
++ L +IK K N Q+ IE
Sbjct: 1100 TFQDKLY-SEIKEKL---STNTQQRIE 1122
>AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p
protein.
Length = 451
Score = 61.7 bits (143), Expect = 9e-10
Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 14/212 (6%)
Frame = +3
Query: 9 ILRDIPKQPWDIIGADMFF------YKNNIYLMVVDYLTKYVEIINMVDQSTQSHILALK 170
+L +P++PW + AD + N++ L++VD +K+ EI+ M +T++ A++
Sbjct: 153 MLTQVPEEPWATVCADFVGPLPRSKHGNSMLLVLVDRFSKWTEIVPMRRATTETMRKAVR 212
Query: 171 Q-MFARWGIPTKLCTDDASQFNSYEFQEFVKEWGFQLVKSSPYYARSNGMVERHIQIVKK 347
+ + AR+G+P + TD+ Q F++F++E G + ++PY + N ER + VK
Sbjct: 213 ERIVARYGVPKVMITDNNVQLTIRAFRKFLEELGVRHQLTAPYTPQEN-PTERANRTVKT 271
Query: 348 MFKK-CDFDQK---DIYMALMEYRNTPIDSEINMSPNELLLGRQ---TVTLLPTRSSLPG 506
M + DQ+ + + L NT + SP + GR+ L +++ G
Sbjct: 272 MIAQFTGADQRTWDEHWPELQLAVNTSVAETTGYSPAFITQGREPRLPNALFDEKTTGTG 331
Query: 507 KNKLKKVRNSLQKKQIKYKYYHDRRNNQKGIE 602
K V N+ + K+I + RRN +K ++
Sbjct: 332 KCTQTPVENAEKLKEI---FELVRRNMEKAVQ 360
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 60.9 bits (141), Expect = 2e-09
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Frame = +3
Query: 3 TLILRDIPKQPWDIIGADMFFYKNNIYLMVVDYLTKYVEIINMVDQSTQSHILALKQMFA 182
T + ++P +P DI+ D++ N L ++D +K+ + +++ + + ALK +
Sbjct: 805 TYQISELPSKPLDILHIDIYTINKNYNLTIIDKFSKFAAAYPITNRNCINVVKALKHFIS 864
Query: 183 RWGIPTKLCTDDASQFNSYEFQEFVKEWGFQLVKSSPYYARSNGMVERHIQIVKKMFK-- 356
++GIP KL D ++F S F +F ++ L +S + SN VER + ++++
Sbjct: 865 QFGIPKKLIYDQGAEFASDMFNKFCTQFNIDLHVTSFQQSSSNSPVERLHSTLTEIYRII 924
Query: 357 -------KCDFDQKDIYMALMEYRNTPIDSEINMSPNELLLGR 464
K + +I + N I S +P EL GR
Sbjct: 925 LDVRKQQKLSSEHDEIMSETLITYNNAIHSATKHTPFELFNGR 967
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 58.0 bits (134), Expect = 1e-08
Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 8/155 (5%)
Frame = +3
Query: 12 LRDIPKQPWDIIGADMFFYKNNI-YLMVVDYLTKYVEIINMVDQSTQSHILALKQMFARW 188
+ + P + DII D+++ K NI Y+ +D ++KY ++ D+S S + A+K
Sbjct: 792 ITETPDKINDIIHIDIWYPKRNIMYVTSIDKMSKYATAQHIKDRSWISLLNAIKLRIQYL 851
Query: 189 GIPTKLCTDDASQFNSYEFQEFVKEWGFQLVKSSPYYARSNGMVER-------HIQIVKK 347
G P K+ TD ++F+ ++F+ E + ++PY N VER H+++
Sbjct: 852 GKPKKIVTD--NEFDIVVIKQFLLENNIDIHFTTPYKKTGNSDVERLHLTLNEHMRLYNA 909
Query: 348 MFKKCDFDQKDIYMALMEYRNTPIDSEINMSPNEL 452
D Q+++Y A++ Y NT I S N+ P +L
Sbjct: 910 DPNNFDTIQENVYKAIVCYNNT-IHSTTNIRPIDL 943
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 56.8 bits (131), Expect = 2e-08
Identities = 46/211 (21%), Positives = 97/211 (45%), Gaps = 7/211 (3%)
Frame = +3
Query: 21 IPKQPWDIIGADMFFYKNNIYLMVVDYLTKYVEIINMVDQSTQSHILALKQMFARWGIPT 200
+P+ P II D++ + ++ L +D +K + ++ + AL+ + +G+P
Sbjct: 815 LPEYPGQIIHIDIYSTERHLVLTAIDKFSKLAMGRVIKSKAVEDIRKALRDIVFYYGVPK 874
Query: 201 KLCTDDASQFNSYEFQEFVKEW-GFQLVKSSPYYARSNGMVERHIQIVKKMFKKCDFD-- 371
+ D+ NS + + + G +L K+ PY + NG +ER + ++ + D
Sbjct: 875 LIVMDNEKSLNSASIKFMLTDQLGIELYKAPPYKSTVNGQIERFHSTLSEIMRCLKGDGT 934
Query: 372 ----QKDIYMALMEYRNTPIDSEINMSPNELLLGRQTVTLLPTRSSLPGKNKLKKVRNSL 539
++ + A+ EY N + S P E+ GR T+ P + + + ++R
Sbjct: 935 HRGFEELLDRAIYEY-NYTVHSVTKKRPLEVFFGR-IATVAPEKYEQARLDNIDRLR--- 989
Query: 540 QKKQIKYKYYHDRRNNQKGIEFTEGQNVFIR 632
QK++ +Y++ R K + +GQ +F+R
Sbjct: 990 QKQETDIEYHNRTRKPIK--TYIKGQEIFVR 1018
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 52.8 bits (121), Expect = 4e-07
Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 25/232 (10%)
Frame = +3
Query: 12 LRDIPK--QPWDIIGADMFFY------KNNIYLMVVDYLTKYVEIINMVDQSTQSHILAL 167
L +IPK +P++II D + K +I L++VD TK+V + +T+ I +L
Sbjct: 1258 LHNIPKGNKPFEIIHIDHYGPVDLARPKKHI-LVIVDAFTKFVRLYATKTTNTKEVIQSL 1316
Query: 168 KQMFARWGIPTKLCTDDASQFNSYEFQEFVKEWGFQLVKSSPYYARSNGMVERHIQIVKK 347
F + P + +D + F S +F F+KE + +K + ++NG VER + +
Sbjct: 1317 NDYFRAYSRPKCIISDRGACFTSGDFDSFLKECNVKHIKIATGSPQANGQVERINRSLGP 1376
Query: 348 MFKK-CDFDQK---DIYMALMEYR-NTPIDSEINMSPNELLLG----RQTVTLLPTRSSL 500
M K + DQ D+ + +EY N + I P+ +L G Q + L +
Sbjct: 1377 MISKLIEPDQGLHWDLVLEKVEYTLNNTLHRSIKQYPSIMLFGLQQKGQIMDELKEKIEE 1436
Query: 501 PG----KNKLKKVRN----SLQKKQIKYKYYHDRRNNQKGIEFTEGQNVFIR 632
G + L+ +RN S + Q K Y D++ + G+ FT+G +++
Sbjct: 1437 IGETIEERDLESIRNKGEASQKIAQAYNKEYVDKKRKRSGV-FTKGTTSWLK 1487
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 48.0 bits (109), Expect = 1e-05
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 4/140 (2%)
Frame = +3
Query: 84 LMVVDYLTKYVEIINMVDQSTQSHILALKQMFARWGIPTKLCTDDASQFNSYEFQEFVKE 263
L VD +K+V + + + L +G P ++ +D + F S F++F+
Sbjct: 1060 LATVDAFSKFVWLFPTKSTGQEEVVKRLTDWSNIFGFPKRIVSDKGTAFTSGAFEQFMSS 1119
Query: 264 WGFQLVKSSPYYARSNGMVERHIQIVKKMFKKCDFDQ-KDIYMALMEYR---NTPIDSEI 431
+ V ++ AR NG +ER +++ + K D+ Y + E + N + S +
Sbjct: 1120 HNVEHVCTTTGVARGNGQIERVNRLILAIISKLSSDEPSKWYKYVPEVQKAINCHVHSSL 1179
Query: 432 NMSPNELLLGRQTVTLLPTR 491
+SP E++ G + T + R
Sbjct: 1180 KLSPFEVMFGTKMYTRVEDR 1199
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p protein.
Length = 1026
Score = 45.6 bits (103), Expect = 6e-05
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 4/140 (2%)
Frame = +3
Query: 84 LMVVDYLTKYVEIINMVDQSTQSHILALKQMFARWGIPTKLCTDDASQFNSYEFQEFVKE 263
L VD +K+V + + + L +G P ++ +D + F S F++F+
Sbjct: 753 LATVDAFSKFVWLFPTKSTGQEEVVKRLTDWSNIFGFPKRIVSDKGTAFTSGAFEQFMSS 812
Query: 264 WGFQLVKSSPYYARSNGMVERHIQIVKKMFKKCDFDQ-KDIYMALMEYR---NTPIDSEI 431
+ V ++ AR NG +ER ++ + K D+ Y + E + N + S +
Sbjct: 813 HNVEHVCTTTGVARGNGQIERVNRLNLAIISKLSSDEPSKWYKYVPEVQKAINCHVHSSL 872
Query: 432 NMSPNELLLGRQTVTLLPTR 491
+SP E++ G + T + R
Sbjct: 873 KLSPFEVMFGTKMYTRVEDR 892
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 45.2 bits (102), Expect = 8e-05
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Frame = +3
Query: 21 IPKQPWDIIGADMFFYKNNIYLMVVDYLTKYVEIINMVDQSTQSHILALKQMFARW-GIP 197
IP +++ D+F ++L +D +KY + +V ++ L Q+ + I
Sbjct: 777 IPSYTGEMVHIDIFSTDRKLFLTCIDKFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIK 836
Query: 198 TKLCTDDASQFNSYEFQEFVKE-WGFQLVKSSPYYARSNGMVER-HIQIVK-----KMFK 356
T C D+ FNS +K +G +V + P ++ SNG VER H + + K+ K
Sbjct: 837 TVYC-DNEPAFNSETVTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDK 895
Query: 357 KCDFDQKDIYMALMEYRNT 413
K + + I A +EY T
Sbjct: 896 KTNDTVELILRATIEYNKT 914
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 45.2 bits (102), Expect = 8e-05
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Frame = +3
Query: 21 IPKQPWDIIGADMFFYKNNIYLMVVDYLTKYVEIINMVDQSTQSHILALKQMFARW-GIP 197
IP +++ D+F ++L +D +KY + +V ++ L Q+ + I
Sbjct: 812 IPSYTGEMVHIDIFSTDRKLFLTCIDKFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIK 871
Query: 198 TKLCTDDASQFNSYEFQEFVKE-WGFQLVKSSPYYARSNGMVER-HIQIVK-----KMFK 356
T C D+ FNS +K +G +V + P ++ SNG VER H + + K+ K
Sbjct: 872 TVYC-DNEPAFNSETVTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDK 930
Query: 357 KCDFDQKDIYMALMEYRNT 413
K + + I A +EY T
Sbjct: 931 KTNDTVELILRATIEYNKT 949
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 45.2 bits (102), Expect = 8e-05
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Frame = +3
Query: 21 IPKQPWDIIGADMFFYKNNIYLMVVDYLTKYVEIINMVDQSTQSHILALKQMFARW-GIP 197
IP +++ D+F ++L +D +KY + +V ++ L Q+ + I
Sbjct: 812 IPSYTGEMVHIDIFSTDRKLFLTCIDKFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIK 871
Query: 198 TKLCTDDASQFNSYEFQEFVKE-WGFQLVKSSPYYARSNGMVER-HIQIVK-----KMFK 356
T C D+ FNS +K +G +V + P ++ SNG VER H + + K+ K
Sbjct: 872 TVYC-DNEPAFNSETVTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIASCLKLDK 930
Query: 357 KCDFDQKDIYMALMEYRNT 413
K + + I A +EY T
Sbjct: 931 KTNDTVELILRATIEYNKT 949
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 45.2 bits (102), Expect = 8e-05
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Frame = +3
Query: 21 IPKQPWDIIGADMFFYKNNIYLMVVDYLTKYVEIINMVDQSTQSHILALKQMFARW-GIP 197
IP +++ D+F ++L +D +KY + +V ++ L Q+ + I
Sbjct: 777 IPSYTGEMVHIDIFSTDRKLFLTCIDKFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIK 836
Query: 198 TKLCTDDASQFNSYEFQEFVKE-WGFQLVKSSPYYARSNGMVER-HIQIVK-----KMFK 356
T C D+ FNS +K +G +V + P ++ SNG VER H + + K+ K
Sbjct: 837 TVYC-DNEPAFNSETVTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDK 895
Query: 357 KCDFDQKDIYMALMEYRNT 413
K + + I A +EY T
Sbjct: 896 KTNDTVELILRATIEYNKT 914
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 45.2 bits (102), Expect = 8e-05
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Frame = +3
Query: 21 IPKQPWDIIGADMFFYKNNIYLMVVDYLTKYVEIINMVDQSTQSHILALKQMFARW-GIP 197
IP +++ D+F ++L +D +KY + +V ++ L Q+ + I
Sbjct: 777 IPSYTGEMVHIDIFSTDRKLFLTCIDKFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIK 836
Query: 198 TKLCTDDASQFNSYEFQEFVKE-WGFQLVKSSPYYARSNGMVER-HIQIVK-----KMFK 356
T C D+ FNS +K +G +V + P ++ SNG VER H + + K+ K
Sbjct: 837 TVYC-DNEPAFNSETVTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDK 895
Query: 357 KCDFDQKDIYMALMEYRNT 413
K + + I A +EY T
Sbjct: 896 KTNDTVELILRATIEYNKT 914
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 45.2 bits (102), Expect = 8e-05
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Frame = +3
Query: 21 IPKQPWDIIGADMFFYKNNIYLMVVDYLTKYVEIINMVDQSTQSHILALKQMFARW-GIP 197
IP +++ D+F ++L +D +KY + +V ++ L Q+ + I
Sbjct: 1230 IPSYTGEMVHIDIFSTDRKLFLTCIDKFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIK 1289
Query: 198 TKLCTDDASQFNSYEFQEFVKE-WGFQLVKSSPYYARSNGMVER-HIQIVK-----KMFK 356
T C D+ FNS +K +G +V + P ++ SNG VER H + + K+ K
Sbjct: 1290 TVYC-DNEPAFNSETVTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDK 1348
Query: 357 KCDFDQKDIYMALMEYRNT 413
K + + I A +EY T
Sbjct: 1349 KTNDTVELILRATIEYNKT 1367
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 44.8 bits (101), Expect = 1e-04
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
Frame = +3
Query: 21 IPKQPWDIIGADMFFYKNNIYLMVVDYLTKYVEIINMVDQSTQSHILALKQMFARW-GIP 197
IP +++ D+F ++L +D +KY + +V ++ L Q+ + I
Sbjct: 782 IPSYTGEMVHIDIFSTDRKLFLTCIDKFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIK 841
Query: 198 TKLCTDDASQFNSYEFQEFVKE-WGFQLVKSSPYYARSNGMVER-HIQIVK-----KMFK 356
T C D+ FNS +K +G +V + P ++ SNG VER H + + K+ K
Sbjct: 842 TVYC-DNEPAFNSETVTSMLKNTFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDK 900
Query: 357 KCDFDQKDIYMALMEYRNT 413
K + I A +EY T
Sbjct: 901 KTSDTVELILRATIEYNKT 919
>AJ279888-1|CAB69645.1| 120|Drosophila melanogaster integrase
protein.
Length = 120
Score = 42.7 bits (96), Expect = 4e-04
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +3
Query: 21 IPKQPWDIIGADMFFYKNNIYLMVVDYLTKYVEIINMVDQSTQSHILALKQMFARW-GIP 197
IP +++ D+F ++L +D +KY + +V ++ L Q+ + I
Sbjct: 9 IPSYTGEMVHIDIFSTDRKLFLTCIDKFSKYAIVQPVVSRTIVDITAPLLQIINLFPNIK 68
Query: 198 TKLCTDDASQFNSYEFQEFVKE-WGFQLVKSSPYYARSNGMVER 326
T C D+ FNS +K +G +V + P ++ SNG VER
Sbjct: 69 TVYC-DNEPAFNSETVTSMLKNSFGIDIVNAPPLHSSSNGQVER 111
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 41.9 bits (94), Expect = 8e-04
Identities = 39/216 (18%), Positives = 92/216 (42%), Gaps = 7/216 (3%)
Frame = +3
Query: 21 IPKQPWDIIGADMFFYKNNIYLMVVDYLTKYVEIINMVDQSTQSHILALKQMFARWGIPT 200
IP P +I+ D+F + +YL +D +K+ ++ ++ +++ L + + P
Sbjct: 757 IPNYPCEILHIDIFALEKRLYLSCIDKFSKFAKLFHLQSKASVHLRETLVEALHYFTAPK 816
Query: 201 KLCTDDASQFNSYEFQEFVKEWGFQLVKSSPYYARSNGMVERHIQIVKKMFKKCDFDQ-- 374
L +D+ +++ L + + NG VER +++ +C D+
Sbjct: 817 VLVSDNERGLLCPTVLNYLRSLDIDLYYAPTQKSEVNGQVERFHSTFLEIY-RCLKDELP 875
Query: 375 -----KDIYMALMEYRNTPIDSEINMSPNELLLGRQTVTLLPTRSSLPGKNKLKKVRNSL 539
+ +++A+ Y NT + S N P ++ R + + + L+ ++ +
Sbjct: 876 TFKPVELVHIAVDRY-NTSVHSVTNRKPADVFFDRSSRVNYQGLTDF-RRQTLEDIKGLI 933
Query: 540 QKKQIKYKYYHDRRNNQKGIEFTEGQNVFIRDSKNK 647
+ KQI+ + +N + + G VF+ + + K
Sbjct: 934 EYKQIRGNMARN-KNRDEPKSYGPGDEVFVANKQIK 968
>AY058502-1|AAL13731.1| 280|Drosophila melanogaster LD21171p
protein.
Length = 280
Score = 41.9 bits (94), Expect = 8e-04
Identities = 39/216 (18%), Positives = 92/216 (42%), Gaps = 7/216 (3%)
Frame = +3
Query: 21 IPKQPWDIIGADMFFYKNNIYLMVVDYLTKYVEIINMVDQSTQSHILALKQMFARWGIPT 200
IP P +I+ D+F + +YL +D +K+ ++ ++ +++ L + + P
Sbjct: 34 IPNYPCEILHIDIFALEKRLYLSCIDKFSKFAKLFHLQSKASVHLRETLVEALHYFTAPK 93
Query: 201 KLCTDDASQFNSYEFQEFVKEWGFQLVKSSPYYARSNGMVERHIQIVKKMFKKCDFDQ-- 374
L +D+ +++ L + + NG VER +++ +C D+
Sbjct: 94 VLVSDNERGLLCPTVLNYLRSLDIDLYYAPTQKSEVNGQVERFHSTFLEIY-RCLKDELP 152
Query: 375 -----KDIYMALMEYRNTPIDSEINMSPNELLLGRQTVTLLPTRSSLPGKNKLKKVRNSL 539
+ +++A+ Y NT + S N P ++ R + + + L+ ++ +
Sbjct: 153 TFKPVELVHIAVDRY-NTSVHSVTNRKPADVFFDRSSRVNYQGLTDF-RRQTLEDIKGLI 210
Query: 540 QKKQIKYKYYHDRRNNQKGIEFTEGQNVFIRDSKNK 647
+ KQI+ + +N + + G VF+ + + K
Sbjct: 211 EYKQIRGNMARN-KNRDEPKSYGPGDEVFVANKQIK 245
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed DNA
polymerase protein.
Length = 1013
Score = 36.3 bits (80), Expect = 0.038
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Frame = +3
Query: 21 IPKQPWDIIGADMFFYKNNIYLMVVDYLTKYV---EIINMVDQSTQSHILALKQMFARWG 191
+P +I+ D+F +L VD +K+ I++ + ++ +L L +F +
Sbjct: 780 VPTHVGEILHIDIFSTDKKYFLTCVDKFSKFAMVQPILSRTIEDLKAPLLQLMNVFPK-- 837
Query: 192 IPTKLCTDDASQFNSYEFQEFVKEWGFQLVKSSPYYARSNGMVER-HIQIVK-----KMF 353
T C ++ S + +G + + P ++ SNG VER H +++ K+
Sbjct: 838 AKTIYCDNEPSLKSQTIVAMLENHFGVSISNAPPLHSVSNGQVERFHSTLIELARCLKID 897
Query: 354 KKCDFDQKDIYMALMEYRNTPIDSEINMSPNELL 455
K + + +A Y N I S IN P E++
Sbjct: 898 KGISDTVELVLLATARY-NMSIHSVINKKPAEVM 930
>AE013599-2588|AAM68478.1| 614|Drosophila melanogaster CG30110-PA
protein.
Length = 614
Score = 33.5 bits (73), Expect = 0.27
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 3/157 (1%)
Frame = +3
Query: 201 KLCTDDASQFNSYEFQEFVKEWGFQLVKSSPYYARSNGMVERHIQIVKKMFKKCDFDQKD 380
K T++ Q SYE + +++ S +++S+ + RH Q + K + +K
Sbjct: 188 KFLTNNIFQNTSYESTKQIRQEINIPPHSLTGHSKSH-INSRHSQKRRNFQKSSKYFRKI 246
Query: 381 IYMALMEYRNTPIDSEINMSPNELLLGRQTVTLLPTRSSLPGKNKLKKVRNSLQKKQIKY 560
+ + +N P +S N SP EL +T T+ + S K KK S KK +K
Sbjct: 247 ANIKKFKNKNDPRNSTNNGSPTEL----KTETMNYSERSQQRKQFQKKFPKSFDKK-LKT 301
Query: 561 KYYHDRRNNQKGIEFTEGQNVFIRDSK---NKNLRGE 662
+ R++ + GI+ + F DS+ N +RG+
Sbjct: 302 RTLKIRKSLKTGIKNLRSSSRFSMDSQDVSNPKVRGQ 338
>X15707-1|CAA33737.1| 267|Drosophila melanogaster protein (
Drosophila melanogasterDNA sequence (isolate CBS) for
18S rRNA (3'end), 5.8SrRNA and 28S rRNA (5'end). ).
Length = 267
Score = 31.1 bits (67), Expect = 1.4
Identities = 22/106 (20%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Frame = +3
Query: 21 IPKQPWDIIGADMFFYKNNIYLMVVDYLTKYV---EIINMVDQSTQSHILALKQMFARWG 191
IP +++ D+F +L +D +K+ + + + + IL + F R
Sbjct: 58 IPSHVGELLHIDIFSTDKKYFLTCIDKFSKFAIEQHVHSRTIEDLKPAILQIMNFFPRAR 117
Query: 192 IPTKLCTDDASQFNSYEFQEFV-KEWGFQLVKSSPYYARSNGMVER 326
+ + D+ NS+ + +G + + P ++ SNG VER
Sbjct: 118 V---VYCDNEPSLNSHTISTMLDNHFGVSIANAPPLHSVSNGQVER 160
>AY051871-1|AAK93295.1| 551|Drosophila melanogaster LD36546p
protein.
Length = 551
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -1
Query: 502 GKEDLVGNKVTVCLPKSNSLGDMLISESIGVL 407
G E L G + LPKS SL D L+SE+ G L
Sbjct: 60 GGEGLEGEEAGKRLPKSASLVDSLVSEATGWL 91
>AF145306-1|AAF08387.1| 413|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p48A protein.
Length = 413
Score = 28.7 bits (61), Expect = 7.6
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +3
Query: 477 LLPTRSSLPGKNKLKKVRNSLQKKQIKYKYYHDRRNNQKGIEFTEGQNVFIRDSKNKNLR 656
L+P + L KLK +SL + ++ Y ++ QK +EF E Q +I+D + +NL+
Sbjct: 8 LIPEKDELSDL-KLKDAHSSLDELDMEDLYVRYKKL-QKTLEFIEVQEEYIKD-EQRNLK 64
Query: 657 GE 662
E
Sbjct: 65 KE 66
>AE014298-1555|AAF48001.1| 413|Drosophila melanogaster CG16916-PA
protein.
Length = 413
Score = 28.7 bits (61), Expect = 7.6
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +3
Query: 477 LLPTRSSLPGKNKLKKVRNSLQKKQIKYKYYHDRRNNQKGIEFTEGQNVFIRDSKNKNLR 656
L+P + L KLK +SL + ++ Y ++ QK +EF E Q +I+D + +NL+
Sbjct: 8 LIPEKDELSDL-KLKDAHSSLDELDMEDLYVRYKKL-QKTLEFIEVQEEYIKD-EQRNLK 64
Query: 657 GE 662
E
Sbjct: 65 KE 66
>AE014297-2121|AAF55255.2| 374|Drosophila melanogaster CG8884-PB,
isoform B protein.
Length = 374
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -1
Query: 502 GKEDLVGNKVTVCLPKSNSLGDMLISESIGVL 407
G E L G + LPKS SL D L+SE+ G L
Sbjct: 60 GGEGLEGEEAGKRLPKSASLVDSLVSEATGWL 91
>AE014297-2119|AAN13686.1| 551|Drosophila melanogaster CG8884-PH,
isoform H protein.
Length = 551
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -1
Query: 502 GKEDLVGNKVTVCLPKSNSLGDMLISESIGVL 407
G E L G + LPKS SL D L+SE+ G L
Sbjct: 60 GGEGLEGEEAGKRLPKSASLVDSLVSEATGWL 91
>AE014297-2118|AAN13685.1| 551|Drosophila melanogaster CG8884-PE,
isoform E protein.
Length = 551
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -1
Query: 502 GKEDLVGNKVTVCLPKSNSLGDMLISESIGVL 407
G E L G + LPKS SL D L+SE+ G L
Sbjct: 60 GGEGLEGEEAGKRLPKSASLVDSLVSEATGWL 91
>AE014297-2117|AAN13684.1| 551|Drosophila melanogaster CG8884-PD,
isoform D protein.
Length = 551
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -1
Query: 502 GKEDLVGNKVTVCLPKSNSLGDMLISESIGVL 407
G E L G + LPKS SL D L+SE+ G L
Sbjct: 60 GGEGLEGEEAGKRLPKSASLVDSLVSEATGWL 91
>AE014297-2116|AAN13683.1| 551|Drosophila melanogaster CG8884-PC,
isoform C protein.
Length = 551
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -1
Query: 502 GKEDLVGNKVTVCLPKSNSLGDMLISESIGVL 407
G E L G + LPKS SL D L+SE+ G L
Sbjct: 60 GGEGLEGEEAGKRLPKSASLVDSLVSEATGWL 91
>AE014297-2115|AAN13682.1| 551|Drosophila melanogaster CG8884-PA,
isoform A protein.
Length = 551
Score = 28.7 bits (61), Expect = 7.6
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -1
Query: 502 GKEDLVGNKVTVCLPKSNSLGDMLISESIGVL 407
G E L G + LPKS SL D L+SE+ G L
Sbjct: 60 GGEGLEGEEAGKRLPKSASLVDSLVSEATGWL 91
>AE014296-3423|AAF51643.2| 1959|Drosophila melanogaster CG11451-PA
protein.
Length = 1959
Score = 28.3 bits (60), Expect = 10.0
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 408 NTPIDSEINMSPNELLLGRQTVTLLPTRSSLPGKNKLK-KVRNSLQKKQI 554
N+P ++ P +L + +TL PT++S GKNK K K + QK ++
Sbjct: 382 NSPKKDIRSIVPRGMLNFSENMTLTPTKTSPVGKNKEKLKAADEKQKYRL 431
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,162,831
Number of Sequences: 53049
Number of extensions: 546090
Number of successful extensions: 1107
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1099
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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