Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9e12
(217 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0588 + 4795620-4796093,4796124-4797476,4797575-4797827,479... 29 0.51
09_04_0220 - 15813809-15815380 29 0.51
12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232 28 0.89
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458... 28 0.89
02_01_0555 + 4086434-4087157,4087257-4087943,4088495-4089162 28 0.89
02_01_0192 + 1302358-1302781,1303330-1303394,1303794-1303856,130... 28 1.2
10_08_0187 + 15592130-15592512,15592597-15592972 27 2.1
09_04_0160 + 15226762-15227032,15227138-15227373,15227469-152275... 27 2.7
04_04_1696 + 35448667-35449641,35449726-35450562,35450667-354510... 26 3.6
01_01_0220 + 1866989-1868393,1868465-1869153 26 3.6
11_06_0062 + 19709801-19710832,19712383-19712568,19712661-197128... 26 4.8
05_05_0018 - 21547649-21547875,21547973-21548187,21548831-215490... 26 4.8
03_01_0129 - 1005010-1005042,1005227-1005413,1005516-1005763,100... 26 4.8
02_05_0502 + 29569563-29570487,29570548-29570621 26 4.8
06_02_0181 - 12694304-12694398,12694512-12695547 25 6.3
11_01_0647 - 5247217-5247467,5247593-5247842,5247943-5249793 25 8.3
11_01_0643 - 5174154-5174254,5174296-5174346,5174611-5174739,517... 25 8.3
09_06_0172 + 21329904-21331512,21331595-21331740,21332333-213325... 25 8.3
08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767 25 8.3
06_03_1175 + 28168007-28170058 25 8.3
05_01_0006 - 44159-44206,44805-44850,45730-45818,46377-46394,464... 25 8.3
04_01_0567 - 7263744-7263922,7264020-7264259,7264919-7264982,726... 25 8.3
01_06_0575 - 30357556-30357582,30357698-30357944,30358039-303581... 25 8.3
>12_01_0588 +
4795620-4796093,4796124-4797476,4797575-4797827,
4797989-4798108,4798542-4798564,4798734-4798841
Length = 776
Score = 29.1 bits (62), Expect = 0.51
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 94 VLLKLASVREVHPAPNPLLQSQHQAYYPS 8
+ L++A+V+ HPAP+ L+Q+ A YPS
Sbjct: 199 IALRIAAVQADHPAPDKLVQTM-TAQYPS 226
>09_04_0220 - 15813809-15815380
Length = 523
Score = 29.1 bits (62), Expect = 0.51
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 1 KKKKGNKPGAAIGGGDSEPDEPLEPKPALKVQRKG 105
K+ G A GGGD+E +E E K AL+ ++G
Sbjct: 471 KRPPSAAAGNATGGGDNEEEEEEEEKRALESPKEG 505
>12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232
Length = 1035
Score = 28.3 bits (60), Expect = 0.89
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 16 NKPGAAIGGGDSEPDEPLEPKPALKVQRKG 105
++ GAA GG S+P P+ P + V R+G
Sbjct: 30 SRVGAARGGPRSDPATPIPVSPRVSVMRRG 59
>08_01_0527 +
4580599-4580818,4580933-4581806,4581891-4581955,
4582055-4582110,4582955-4583058,4583310-4583382,
4583474-4583654,4584537-4584622
Length = 552
Score = 28.3 bits (60), Expect = 0.89
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 1 KKKKGNKPGAAIGGGDSEPDE-PLEPKP 81
KKKK KP AA+GGG DE P KP
Sbjct: 36 KKKKKPKPAAAVGGGVLIVDEDPTWHKP 63
>02_01_0555 + 4086434-4087157,4087257-4087943,4088495-4089162
Length = 692
Score = 28.3 bits (60), Expect = 0.89
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 1 KKKKGNKPGAAIGGGDSEPDEP-LEPKPALKVQR 99
+K++ +PG GGD P P L PA+ + R
Sbjct: 296 RKRRRRRPGPGEPGGDQTPSNPKLHTAPAVNINR 329
>02_01_0192 +
1302358-1302781,1303330-1303394,1303794-1303856,
1304224-1304232
Length = 186
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 4 KKKGNKPGAAIGGGDSEPDEPLEPKPAL 87
K GNK A+ GGG ++ LEP PA+
Sbjct: 48 KGAGNKGEASGGGGGKGKEKALEPPPAV 75
>10_08_0187 + 15592130-15592512,15592597-15592972
Length = 252
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 1 KKKKGNKPGAAIGGGDSEPDEPLE 72
KKKK K G+ + GGD E +E E
Sbjct: 91 KKKKKKKQGSMVVGGDREEEEEEE 114
>09_04_0160 +
15226762-15227032,15227138-15227373,15227469-15227565,
15227657-15227783,15227870-15228482,15228572-15228835,
15228918-15229130,15229253-15229460,15229552-15229748,
15229830-15230183,15230287-15230874
Length = 1055
Score = 26.6 bits (56), Expect = 2.7
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 1 KKKKGNKPGAAIGGGDSEPDEPLEPKPALKVQRKGDVFTIQVNPLK 138
K K+G G A D + D PL + + RK + + +VNP +
Sbjct: 222 KSKQGIVAGGAPDPDDYDADVPLNDEARQPLSRKVSIASSKVNPYR 267
>04_04_1696 +
35448667-35449641,35449726-35450562,35450667-35451001,
35451371-35451497,35451594-35451752,35451872-35453053,
35453164-35453424,35453513-35453761
Length = 1374
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -2
Query: 174 IWILVRCYLCQIFQWINLYSENVTLSLYF*SWLRFERFIRLRIPSSNRSTRL 19
IW+ RC C+ + I+ S V +S + L F +F+ L S + + RL
Sbjct: 650 IWMWTRCLRCEHERGISKSSRRVLISTEARN-LSFGKFLELSFSSHSAARRL 700
>01_01_0220 + 1866989-1868393,1868465-1869153
Length = 697
Score = 26.2 bits (55), Expect = 3.6
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 13 GNKPGAAIG--GGDSEPDEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAPNED 168
G+ P AA G P+ P P+P +KGDV+ V L+ LT P +
Sbjct: 539 GSSPAAAAARSAGYRAPEAPPPPRPW--ASQKGDVYAFGVVLLELLTGRCPGSE 590
>11_06_0062 +
19709801-19710832,19712383-19712568,19712661-19712867,
19712940-19713078,19713172-19713380,19713520-19714134
Length = 795
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +1
Query: 1 KKKKGN---KPGAAIGGGDSEPDEPLEPKPALKVQRKGD 108
+ KKG+ P GG+ EP PL P ++V+ GD
Sbjct: 26 RPKKGSVSRSPHYPCPGGEEEPPPPLAPGTDVEVRLDGD 64
>05_05_0018 -
21547649-21547875,21547973-21548187,21548831-21549096,
21549534-21549657,21549946-21550041,21550179-21550294,
21550374-21550455,21550574-21550728,21550819-21551001,
21551114-21551305,21551389-21551564,21551676-21551729,
21552076-21552147,21552255-21552582
Length = 761
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 91 VQRKGDVFTIQVNPLKDLTEIAPNEDPYVDCDPLVFKII 207
++R+ + T+Q P K++ EI + DP LV K+I
Sbjct: 490 LKRRLRIRTLQYRPAKNINEIYDSVDPETLLHILVHKVI 528
>03_01_0129 -
1005010-1005042,1005227-1005413,1005516-1005763,
1006224-1006406
Length = 216
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 10 KGNKPGAAIGGGDSEPDEPLEPKPALKVQR 99
KG K GA+ GGG P++PK L+V R
Sbjct: 25 KGKKGGAS-GGGGGGRWPPVKPKKDLQVNR 53
>02_05_0502 + 29569563-29570487,29570548-29570621
Length = 332
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 16 NKPGAAIGGGDSEPDE 63
NKP A IGGGDS +E
Sbjct: 157 NKPIAVIGGGDSAMEE 172
>06_02_0181 - 12694304-12694398,12694512-12695547
Length = 376
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 16 NKPGAAIGGGDSEPDE 63
NKP A +GGGDS +E
Sbjct: 194 NKPIAVVGGGDSAMEE 209
>11_01_0647 - 5247217-5247467,5247593-5247842,5247943-5249793
Length = 783
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -1
Query: 88 LKLASVREVHPAPNPLLQSQHQAYYPS 8
L++A+++ HPAP+ L ++ A YPS
Sbjct: 212 LRIAALKAGHPAPDDLARTM-TAQYPS 237
>11_01_0643 -
5174154-5174254,5174296-5174346,5174611-5174739,
5174869-5175118,5175220-5177157
Length = 822
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = -1
Query: 88 LKLASVREVHPAPNPLLQSQHQAYYPS 8
L++A+++ HPAP+ L ++ A YPS
Sbjct: 215 LRIAALKAGHPAPDDLARTM-TAQYPS 240
>09_06_0172 +
21329904-21331512,21331595-21331740,21332333-21332556,
21333689-21334448
Length = 912
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 40 GGDSEPDEPLEPKPALKVQRKGD 108
G S P PLEP L RKGD
Sbjct: 51 GVQSLPPPPLEPTLRLPAHRKGD 73
>08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767
Length = 1041
Score = 25.0 bits (52), Expect = 8.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 55 PDEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAP 159
P P+EPK L V R V T+++NP + +AP
Sbjct: 557 PRPPVEPK--LGVARGAAVPTLKMNPSWEKPSVAP 589
>06_03_1175 + 28168007-28170058
Length = 683
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1
Query: 37 GGGDSEPDEPLEPKPALKVQ 96
GGGD E DE E KP+ K Q
Sbjct: 34 GGGDGE-DEEEEEKPSFKAQ 52
>05_01_0006 -
44159-44206,44805-44850,45730-45818,46377-46394,
46490-46609,46702-46772,47038-47086,47567-47658,
47769-47811,47928-48049,48143-48426,48961-49148,
49220-49336,49516-49557,49991-50101,50530-50688,
50710-50769,50850-50927,51010-51103,51182-51483,
51659-51721,51808-51936
Length = 774
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
Frame = +1
Query: 109 VFTIQVNPLKD------LTEIAPNEDPYVDCDPLVFKIIKK 213
+ I+V PL D + ++ NE + CDP ++IKK
Sbjct: 614 LLAIEVQPLDDRKRKGEIVKVYANEQKKITCDPETKELIKK 654
>04_01_0567 -
7263744-7263922,7264020-7264259,7264919-7264982,
7265088-7265393,7265652-7265866,7266195-7266489,
7266596-7266655,7267091-7267717,7268510-7268596,
7269292-7269612,7270051-7270224,7272806-7275022
Length = 1594
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 10 KGNKPGAAIGGGDSEPDEPLEPKPAL 87
+ + G A G GD +EPL KP++
Sbjct: 70 RSRREGIANGNGDHAEEEPLLAKPSV 95
>01_06_0575 -
30357556-30357582,30357698-30357944,30358039-30358161,
30358275-30358301,30358475-30358633,30359764-30359948,
30360225-30360293,30360432-30362354,30363018-30363339,
30363506-30363543
Length = 1039
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 37 GGGDSEPDEPLEPKPALKVQR 99
GGGD EP PL P K R
Sbjct: 33 GGGDGEPPPPLPPMEPPKRSR 53
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.139 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,530,087
Number of Sequences: 37544
Number of extensions: 94472
Number of successful extensions: 342
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 342
length of database: 14,793,348
effective HSP length: 51
effective length of database: 12,878,604
effective search space used: 257572080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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