Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9e12
         (217 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    22   0.95 
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    22   0.95 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   2.2  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   2.2  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    20   3.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    19   5.1  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     19   5.1  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            19   5.1  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    19   6.7  

>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 21.8 bits (44), Expect = 0.95
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +1

Query: 28  AAIGGGDSEPDEPLEPKPALKVQRKGDVFT 117
           A + G  +  +  L+P+P+ ++ + GD +T
Sbjct: 18  AKVLGDQNLVNTVLQPRPSFELSKNGDEWT 47


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 0.95
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +1

Query: 28  AAIGGGDSEPDEPLEPKPALKVQRKGDVFT 117
           A + G  +  +  L+P+P+ ++ + GD +T
Sbjct: 20  AKVLGDQNLVNTVLQPRPSFELSKNGDEWT 49


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = +1

Query: 31  AIGGGDSEPDEPLEPKPALKVQRKGDVFTIQVNPLKDLTE 150
           AI GG   PDE +      KV          +N L D+ E
Sbjct: 292 AIAGGQQRPDENVVTDKKSKVNFALPELQHNLNILVDMCE 331


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 111 NVTLSLYF*SWLRFERF 61
           N  + LYF S +RF RF
Sbjct: 20  NYFIFLYFNSLVRFRRF 36


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +2

Query: 20  SLVLRLEEGIRS 55
           +LVLRL EGI S
Sbjct: 89  ALVLRLREGIGS 100


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 170 GSSFGAISVRSFNGL 126
           GS   +I  R+FNGL
Sbjct: 827 GSGIESIQNRTFNGL 841


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 10/17 (58%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
 Frame = -1

Query: 49  NP-LLQSQHQAYYPSFS 2
           NP L+QSQ    YPS S
Sbjct: 430 NPALIQSQPSPQYPSTS 446


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 173 YGSSFGAISVRSFNGLTCIVK 111
           YG+   AIS R +NG+  +++
Sbjct: 248 YGNE--AISKREYNGIGAVIE 266


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 58  DEPLEPKPALK 90
           DEPL P P ++
Sbjct: 372 DEPLPPPPPIR 382


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.311    0.139    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,769
Number of Sequences: 438
Number of extensions: 860
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3154875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.0 bits)