Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9e07
         (207 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q92BG4 Cluster: ComC protein; n=11; Listeria|Rep: ComC ...    32   2.9  
UniRef50_Q4YQ84 Cluster: Putative uncharacterized protein; n=1; ...    32   2.9  
UniRef50_Q8M9V8 Cluster: Cell division protein; n=1; Chaetosphae...    30   9.0  

>UniRef50_Q92BG4 Cluster: ComC protein; n=11; Listeria|Rep: ComC
           protein - Listeria innocua
          Length = 236

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +3

Query: 60  LFYFNTCNYCEKTLCFS*EYCKKKFLFFLSK 152
           LF F+ CN+C+KTL FS       FLF   K
Sbjct: 31  LFRFSECNHCQKTLSFSQMIPIYSFLFLKGK 61


>UniRef50_Q4YQ84 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 897

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 14/23 (60%), Positives = 17/23 (73%)
 Frame = -1

Query: 150 YLKKIKTFFYNILKKSIGSFHNN 82
           YLKKIK  F N L +SIG+ +NN
Sbjct: 357 YLKKIKNMFINKLNRSIGNDNNN 379


>UniRef50_Q8M9V8 Cluster: Cell division protein; n=1;
           Chaetosphaeridium globosum|Rep: Cell division protein -
           Chaetosphaeridium globosum
          Length = 1627

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = -1

Query: 159 QRIYLKKIKTFFYNILKK 106
           + I+LKK K FFYN+LKK
Sbjct: 790 ENIWLKKSKKFFYNLLKK 807


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,211,157
Number of Sequences: 1657284
Number of extensions: 1865735
Number of successful extensions: 5247
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5246
length of database: 575,637,011
effective HSP length: 47
effective length of database: 497,744,663
effective search space used: 10452637923
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)