Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9e07
         (207 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   3.1  
SB_16157| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   4.1  
SB_6255| Best HMM Match : No HMM Matches (HMM E-Value=.)               25   9.5  
SB_10601| Best HMM Match : MFS_1 (HMM E-Value=0.017)                   25   9.5  

>SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 956

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +3

Query: 51  EFTLFYFNTCNYCEKTLCFS*EY 119
           EF  FY NTC  C   LC   E+
Sbjct: 248 EFVKFYCNTCGECACQLCILEEH 270


>SB_16157| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 290

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 63  FYFNTCNYCEKTLCFS*EYCKK 128
           +Y   CN C+  LCFS   C++
Sbjct: 203 YYQQGCNKCKVQLCFSASQCER 224


>SB_6255| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 526

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 156 RIYLKKIKTFFYNILKKSIGSFHNNY 79
           +IY KK   FF  IL+K+  S H  Y
Sbjct: 201 KIYNKKKNDFFSGILRKTGSSMHIAY 226


>SB_10601| Best HMM Match : MFS_1 (HMM E-Value=0.017)
          Length = 541

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 123 KKKFLFFLSKYVVFLLNTIIMFLSPKKK 206
           KKKF+  L  +   L   +IM + PKK+
Sbjct: 84  KKKFILLLGIFSWLLKGLVIMLIWPKKQ 111


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,308,597
Number of Sequences: 59808
Number of extensions: 55630
Number of successful extensions: 105
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 105
length of database: 16,821,457
effective HSP length: 47
effective length of database: 14,010,481
effective search space used: 294220101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)