Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9e07
         (207 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81489-11|CAJ30223.1|  323|Caenorhabditis elegans Hypothetical p...    27   2.4  
Z77659-5|CAB01168.1|  953|Caenorhabditis elegans Hypothetical pr...    26   3.2  
Z22176-2|CAD91716.2|  650|Caenorhabditis elegans Hypothetical pr...    25   5.6  
AC090999-24|AAK26151.1|  502|Caenorhabditis elegans Hypothetical...    25   5.6  
AC103567-4|AAL35731.2|  598|Caenorhabditis elegans Hypothetical ...    25   7.4  
Z35400-1|CAA84584.1|  532|Caenorhabditis elegans putative transp...    25   9.7  
Z32683-13|CAA83630.1|  386|Caenorhabditis elegans Hypothetical p...    25   9.7  
U12433-1|AAA20582.1|  532|Caenorhabditis elegans putative transp...    25   9.7  

>Z81489-11|CAJ30223.1|  323|Caenorhabditis elegans Hypothetical
           protein C55A1.14 protein.
          Length = 323

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 82  IIVKRPYAFLENIVKKSFYFF*VNTLSFY*IP 177
           +++K  Y     ++ + F  F +NTLSFY +P
Sbjct: 62  VMIKMAYMIFVILICRVFPCFKINTLSFYLLP 93


>Z77659-5|CAB01168.1|  953|Caenorhabditis elegans Hypothetical
           protein F23B12.7 protein.
          Length = 953

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +1

Query: 64  FISTLVIIVKRPYAFLENIVKKS 132
           FI TLV I+KRP   LE ++K+S
Sbjct: 266 FIETLVEIIKRP---LEEVIKRS 285


>Z22176-2|CAD91716.2|  650|Caenorhabditis elegans Hypothetical
           protein ZK1098.2 protein.
          Length = 650

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 66  YFNTCNYCEKTLCFS*EYCKKKF 134
           YF+ CN     L FS + C+K F
Sbjct: 286 YFDNCNLFTVCLSFSSKMCRKSF 308


>AC090999-24|AAK26151.1|  502|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.1 protein.
          Length = 502

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 48  YEFTLFYFNTCNYCEKTLCF 107
           Y FT FY N C+YC   + F
Sbjct: 208 YSFT-FYCNQCSYCNTNIDF 226


>AC103567-4|AAL35731.2|  598|Caenorhabditis elegans Hypothetical
           protein Y51F10.4 protein.
          Length = 598

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 126 KKFLFFLSKYVVFLLNTIIMFLSP 197
           +KF F +   V+ L NTI+  L+P
Sbjct: 357 EKFTFHILTAVILLFNTILAILTP 380


>Z35400-1|CAA84584.1|  532|Caenorhabditis elegans putative
           transposase protein.
          Length = 532

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 69  FNTCNYCEKTLCFS 110
           F  C YC+K LCF+
Sbjct: 505 FLLCPYCKKVLCFN 518


>Z32683-13|CAA83630.1|  386|Caenorhabditis elegans Hypothetical
           protein R07E5.10a protein.
          Length = 386

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 78  CNYCEKTLCF 107
           CN CEK LCF
Sbjct: 56  CNVCEKPLCF 65


>U12433-1|AAA20582.1|  532|Caenorhabditis elegans putative
           transposase protein.
          Length = 532

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 69  FNTCNYCEKTLCFS 110
           F  C YC+K LCF+
Sbjct: 505 FLLCPYCKKVLCFN 518


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,542,006
Number of Sequences: 27780
Number of extensions: 51555
Number of successful extensions: 107
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 12,740,198
effective HSP length: 48
effective length of database: 11,406,758
effective search space used: 228135160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)