Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9e03
         (755 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010116-1|AAQ22585.1| 1083|Drosophila melanogaster AT29108p pro...    32   0.97 
AE014296-379|AAN11502.2| 1083|Drosophila melanogaster CG1828-PB,...    32   0.97 
AY058280-1|AAL13509.1|  429|Drosophila melanogaster GH03217p pro...    30   3.0  
AE014296-2046|AAN12246.1|  429|Drosophila melanogaster CG32095-P...    30   3.0  
AB083008-1|BAC54898.1| 1044|Drosophila melanogaster supressor of...    30   3.0  
AY118849-1|AAM50709.1|  880|Drosophila melanogaster GM15606p pro...    29   6.8  

>BT010116-1|AAQ22585.1| 1083|Drosophila melanogaster AT29108p protein.
          Length = 1083

 Score = 31.9 bits (69), Expect = 0.97
 Identities = 22/70 (31%), Positives = 32/70 (45%)
 Frame = +3

Query: 408  KPSSNVTELKQVPSSSKHQIEQSVQGQYNESEAKVLYKTSENNFPSSDPSDQTPKSQDHD 587
            KP +   + K+   SSKH   +S + +YN S  K    +S  N  SS   D+     D  
Sbjct: 1014 KPRNGKFDSKKHGKSSKHSPSKSSKDKYN-SRDKHHSSSSSGNKSSSKDKDRKRSRDDSR 1072

Query: 588  DNNRCTEVSR 617
            DN   ++ SR
Sbjct: 1073 DNGHKSKKSR 1082


>AE014296-379|AAN11502.2| 1083|Drosophila melanogaster CG1828-PB,
            isoform B protein.
          Length = 1083

 Score = 31.9 bits (69), Expect = 0.97
 Identities = 22/70 (31%), Positives = 32/70 (45%)
 Frame = +3

Query: 408  KPSSNVTELKQVPSSSKHQIEQSVQGQYNESEAKVLYKTSENNFPSSDPSDQTPKSQDHD 587
            KP +   + K+   SSKH   +S + +YN S  K    +S  N  SS   D+     D  
Sbjct: 1014 KPRNGKFDSKKHGKSSKHSPSKSSKDKYN-SRDKHHSSSSSGNKSSSKDKDRKRSRDDSR 1072

Query: 588  DNNRCTEVSR 617
            DN   ++ SR
Sbjct: 1073 DNGHKSKKSR 1082


>AY058280-1|AAL13509.1|  429|Drosophila melanogaster GH03217p
           protein.
          Length = 429

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +3

Query: 153 LYQRRLVMTLRTPRRRISPRTKHRYRVIRNFFRRAL 260
           ++ + +  T+   RRR   RT+ R+R++R FF R +
Sbjct: 7   IHLKHVETTVLLLRRRTQQRTRRRFRMLRTFFMRQM 42


>AE014296-2046|AAN12246.1|  429|Drosophila melanogaster CG32095-PA
           protein.
          Length = 429

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +3

Query: 153 LYQRRLVMTLRTPRRRISPRTKHRYRVIRNFFRRAL 260
           ++ + +  T+   RRR   RT+ R+R++R FF R +
Sbjct: 7   IHLKHVETTVLLLRRRTQQRTRRRFRMLRTFFMRQM 42


>AB083008-1|BAC54898.1| 1044|Drosophila melanogaster supressor of Ty
            element 16 protein.
          Length = 1044

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +3

Query: 408  KPSSNVTELKQVPSSSKHQIEQSVQGQYNESEAKVLYKTSENNFPSSDPSDQTPKSQDHD 587
            KP +   + K+   SSKH   +S + +YN S  K    +S  N  SS   D+     D  
Sbjct: 975  KPRNGKFDSKKHGKSSKHSPSKSSKDKYN-SRDKHHSSSSSGNKSSSKDKDRKRSRDDSR 1033

Query: 588  DNNRCTEVSR 617
            DN   ++ +R
Sbjct: 1034 DNGHKSKNAR 1043


>AY118849-1|AAM50709.1|  880|Drosophila melanogaster GM15606p
           protein.
          Length = 880

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +3

Query: 393 LENISKPSSNVTELKQVPSSSKHQIEQSVQGQY-NESEAKVLYKTSENNFPSSDPSDQTP 569
           L N+     +++  KQ P++ +  +E     +  N+S+ KVL  T+  +  +++PS  T 
Sbjct: 60  LANLWHTRKDLSSPKQKPNNKEEYLENETASKISNKSDEKVLKSTTIISLNATNPSTSTF 119

Query: 570 KS 575
           KS
Sbjct: 120 KS 121


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,193,164
Number of Sequences: 53049
Number of extensions: 640629
Number of successful extensions: 2255
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2248
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)