Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9d21
(636 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0940 + 26145746-26145879,26146740-26146821,26147349-261474... 32 0.44
05_06_0102 - 25589011-25589181,25589269-25589496,25589589-255899... 32 0.44
05_03_0376 - 13252220-13252354,13252433-13252541,13253279-132533... 32 0.44
09_03_0044 - 11855569-11855664,11855775-11855891,11856572-118566... 31 0.58
05_04_0355 - 20577189-20577275,20578001-20578129,20578252-205783... 31 0.77
08_02_1111 + 24377268-24377444,24377543-24377630,24378072-243781... 30 1.3
03_05_0700 + 26920743-26920771,26920880-26920991,26921205-269213... 30 1.8
04_04_0835 + 28538032-28539006,28539113-28539203,28539291-285394... 29 2.3
08_02_1406 - 26854845-26855606 29 3.1
11_04_0366 - 16832018-16832371,16832746-16834752,16835109-16835480 28 5.4
07_03_0971 + 23038409-23039134,23040321-23040611 28 5.4
03_05_0969 + 29283905-29284570,29284862-29284930,29286533-292866... 28 5.4
04_04_1690 - 35382241-35382553,35382614-35382933,35383601-353851... 28 7.1
01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,467... 28 7.1
06_03_1346 + 29480482-29480676,29480754-29481067,29481164-294812... 27 9.4
03_05_0515 - 25102978-25103115,25103678-25104211,25104236-251048... 27 9.4
>06_03_0940 +
26145746-26145879,26146740-26146821,26147349-26147427,
26147527-26147624,26148392-26148479,26148589-26148686,
26148881-26148982,26149237-26149281,26150535-26150574,
26150988-26151074,26151254-26151330,26151746-26151808,
26152650-26152766,26152905-26153116,26153690-26153785,
26153869-26153935,26154028-26154081
Length = 512
Score = 31.9 bits (69), Expect = 0.44
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 307 EIMCCKYTEDVNEIATGFTDGTIRLFSCNDGTCTHLLV 420
++ C ++ + N IATG +D T+RL+ G C + +
Sbjct: 368 DVDCVQWHVNCNYIATGSSDKTVRLWDVQTGECIRMFI 405
>05_06_0102 -
25589011-25589181,25589269-25589496,25589589-25589933,
25590406-25590777,25590957-25591049,25591150-25591401,
25592019-25593224
Length = 888
Score = 31.9 bits (69), Expect = 0.44
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 307 EIMCCKYTEDVNEIATGFTDGTIRLFSCNDGTCTHLL 417
++ C Y +++ + GF++G L+ D C HLL
Sbjct: 294 KLTACDYHRELDMVVVGFSNGVFGLYQMPDFVCLHLL 330
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 307 EIMCCKYTEDVNEIATGFTDGTIRLFSCNDGTCTHLLVDDECRSYPGPVTAIKHRPVSKA 486
++ C Y+ D +ATG D +++++ + G C + E + VTA+ ++
Sbjct: 379 DVNCIAYSPDSQLLATGADDNKVKVWTVSSGFC--FITFSE---HTNAVTAVHF--MANN 431
Query: 487 HPITNTLLSSYVNGCIKCWK-YKYDQC-LYTIREKRQILGL 603
H +LLS+ ++G I+ W ++Y +T RQ + L
Sbjct: 432 H----SLLSASLDGTIRAWDLFRYRNFKTFTTALPRQFVSL 468
>05_03_0376 -
13252220-13252354,13252433-13252541,13253279-13253337,
13253608-13253700,13254078-13254153,13254405-13254467,
13254535-13254629,13254743-13254845,13254930-13255024,
13255098-13255156,13255445-13255656,13256090-13256222,
13256691-13257081
Length = 540
Score = 31.9 bits (69), Expect = 0.44
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +1
Query: 301 NKEIMCCKYTEDVNEIATGFTDGTIRLFSCNDGT 402
N I CC+++ + +A+ DGT+R+++ + T
Sbjct: 272 NSSISCCRFSASGSNVASSSVDGTVRIWTYDSST 305
>09_03_0044 -
11855569-11855664,11855775-11855891,11856572-11856682,
11856768-11856874,11857182-11857221,11857328-11857408,
11857578-11857631,11857800-11857860,11857984-11858029,
11858276-11858352,11858448-11858563,11858654-11858890
Length = 380
Score = 31.5 bits (68), Expect = 0.58
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 343 EIATGFTDGTIRLFSCNDGTCTHLL 417
++ TG DGT R++ C G CT ++
Sbjct: 224 QVVTGSEDGTARIWDCRSGKCTQVI 248
>05_04_0355 -
20577189-20577275,20578001-20578129,20578252-20578371,
20578505-20578741,20578983-20579258,20579375-20579508,
20580006-20581632
Length = 869
Score = 31.1 bits (67), Expect = 0.77
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +1
Query: 352 TGFTDGTIRLFSCNDGTCTHLLVDDECRSYPGPVTAIKHRPVSKAHPITNTLLSSYVNGC 531
+G DG+IR + D + +L D PG +T PV + +++SY NGC
Sbjct: 706 SGSWDGSIRSWWLTDHSPLSVLEDGT----PGSIT-----PVLSISTELDFVVASYENGC 756
Query: 532 IKCWK 546
+K WK
Sbjct: 757 LKIWK 761
>08_02_1111 +
24377268-24377444,24377543-24377630,24378072-24378157,
24378358-24378511,24378723-24378883,24378964-24379632,
24379860-24380058,24380188-24380405,24380578-24380755,
24380859-24381358
Length = 809
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +1
Query: 277 NVLSVIDTNKEIM-CCKYTEDVNEIATGFTDGTIRLFSCNDGTCTHLLVDDECRSYPGPV 453
++++ ++ +K I+ C + E ATG D T++++S D + LLV + V
Sbjct: 650 HLVAKLEAHKRIIWACSWNPFSYEFATGSRDKTVKIWSVQDSSSVKLLV--TLPQFHDSV 707
Query: 454 TAIKHRPVSKAHPITNTLLSSYVNGCIKCW 543
TA+ +A L NG I+ W
Sbjct: 708 TALAWTGRDRASN-AGILAIGMDNGMIELW 736
>03_05_0700 +
26920743-26920771,26920880-26920991,26921205-26921306,
26921391-26921503,26921858-26921927,26922348-26922425,
26922500-26922616,26922738-26922832,26923080-26923159,
26923405-26923532
Length = 307
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/95 (25%), Positives = 37/95 (38%)
Frame = +1
Query: 280 VLSVIDTNKEIMCCKYTEDVNEIATGFTDGTIRLFSCNDGTCTHLLVDDECRSYPGPVTA 459
V+S +M + D N + +G DGT+R++ TC + E R+ V
Sbjct: 82 VISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTATCQR---EYESRAAVNTVV- 137
Query: 460 IKHRPVSKAHPITNTLLSSYVNGCIKCWKYKYDQC 564
HP L+S NG I+ W + C
Sbjct: 138 --------LHPNQKELISGDQNGNIRVWDLAANSC 164
>04_04_0835 +
28538032-28539006,28539113-28539203,28539291-28539448,
28539543-28539594,28539707-28539786,28539890-28539983,
28540078-28540633,28541160-28541259,28541576-28541617,
28542445-28542588
Length = 763
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +1
Query: 229 HRSFPLEQNQVYQGQVNVLSVIDTNKEIMCCKYTEDVNEIATGFTDGTIRLFSCNDGTCT 408
+R E + VYQGQV + + I+ K++ D +ATG DG +R+++
Sbjct: 193 YRKRSKELSAVYQGQV----IKAHDGAILTMKFSPDGQLLATGGEDGVVRVWAVMQSEDC 248
Query: 409 HLLVDD 426
+ +DD
Sbjct: 249 KIPLDD 254
>08_02_1406 - 26854845-26855606
Length = 253
Score = 29.1 bits (62), Expect = 3.1
Identities = 25/100 (25%), Positives = 35/100 (35%), Gaps = 10/100 (10%)
Frame = +1
Query: 349 ATGFTDGTIRL----FSCNDGTCTHLLVDDECRSYPGPVTAIKHRPVSKAHPITNTLLSS 516
A G G +R+ + C CT + D C YP + A H S H + T +
Sbjct: 27 ACGLCGGRVRMGEMAYRCAAAECTAFFLHDACYRYPERIKAKGH--FSAGHSLALTARAD 84
Query: 517 YVNGCIKCWKYKYD--QCLYTIREKRQIL----GLNYHPR 618
G D +YT + R + G HPR
Sbjct: 85 VAGGACTVCAMTLDGFSHVYTCSKSRHLACGRGGFRAHPR 124
>11_04_0366 - 16832018-16832371,16832746-16834752,16835109-16835480
Length = 910
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 268 GQVNVLSVIDTNKEIMCCKYTEDVNEIATGFT 363
G NV S+ID N+ ++ CK +D+ E+ FT
Sbjct: 693 GLCNVSSIIDANEALLHCK--KDLQELELNFT 722
>07_03_0971 + 23038409-23039134,23040321-23040611
Length = 338
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 292 IDTNKE-IMCCKYTEDVNEIATGFTDGTIRLFSCNDGTCTHLLVDDE 429
ID + E + + D + I +G DGT +++ G+C ++D++
Sbjct: 171 IDAHSEPVTSVHFIRDGSIIVSGSHDGTCKIWDAGTGSCLKTVIDEK 217
>03_05_0969 +
29283905-29284570,29284862-29284930,29286533-29286631,
29287016-29287324
Length = 380
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +1
Query: 283 LSVIDTNKE-IMCCKYTEDVNEIATGFTDGTIRLFSCNDGTCTHLLVDDECRSYPGPVTA 459
L V+ + E + + D I +G DG R++ G C L+DDE PV+
Sbjct: 148 LRVLPAHSEPVTSVDFNRDGAMIVSGSYDGLCRIWDSATGHCIKTLIDDE----SPPVSF 203
Query: 460 IKHRPVSK 483
K P K
Sbjct: 204 AKFSPNGK 211
>04_04_1690 - 35382241-35382553,35382614-35382933,35383601-35385164,
35385254-35385372,35385701-35385811,35386068-35386595,
35386702-35386881,35386957-35387556,35387646-35388066,
35388183-35388280,35388372-35389260,35389366-35389544,
35389647-35389763,35389862-35389952,35390578-35390753
Length = 1901
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 295 DTNKEIMCCKYTEDVNEIATGFTDGTIRLFSCN 393
D + + C + D + +A G G +R+F CN
Sbjct: 1504 DESSLLTCMTFLGDASRVAAGNHTGELRVFDCN 1536
>01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,
4675953-4676072,4676185-4676313,4676394-4676442,
4676899-4676970,4677574-4677707,4677798-4677915,
4678332-4678541,4678630-4678942,4679539-4679632,
4679854-4679962,4680243-4680514,4680597-4680724,
4680832-4681066,4681570-4681758,4681845-4682128,
4682218-4682398,4682486-4682728,4682904-4682986,
4683119-4683227,4687996-4688091,4688675-4688764,
4688881-4689129,4689233-4689412,4690179-4690250,
4691385-4691474,4691605-4691705,4691794-4691959
Length = 1757
Score = 27.9 bits (59), Expect = 7.1
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +1
Query: 340 NEIATGFTDGTIRLFSCNDGTC 405
+++ +G DG++R++ CN G C
Sbjct: 1422 DKLYSGSADGSVRVWDCNSGKC 1443
>06_03_1346 +
29480482-29480676,29480754-29481067,29481164-29481236,
29481517-29481627,29481725-29481899,29481992-29482119,
29482310-29482370,29482893-29482963
Length = 375
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/69 (20%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 226 EHRSFPLEQNQVYQGQVNVLSVIDTNKEIMCCKYTEDVN--EIATGFTDGTIRLFSCNDG 399
E + + ++ + Q + S ++ +K I+ + V+ + + G TD ++ SC+
Sbjct: 210 EFKEYYIQMQASKRSQAPLPSEVNDDKVILDKTIADQVSSWKSSRGLTDDAVKGHSCSGN 269
Query: 400 TCTHLLVDD 426
TC++ + D
Sbjct: 270 TCSYTQIGD 278
>03_05_0515 -
25102978-25103115,25103678-25104211,25104236-25104880,
25106601-25106711
Length = 475
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = -2
Query: 458 AVTGPGYERHSSSTSKCVQVPSLQLNNLIVPSVKPVAISFTSS----VYLQHIISLFVSI 291
+ T P H + Q+ S N++VP + FTSS V++ H+++ F+++
Sbjct: 27 SATAPAASPHQVAVEIDEQIYSPAFGNIVVPDSRGCCSGFTSSVTRVVFILHLLA-FIAL 85
Query: 290 T 288
T
Sbjct: 86 T 86
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,042,299
Number of Sequences: 37544
Number of extensions: 291066
Number of successful extensions: 818
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -