Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9d21
         (636 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   2.5  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    23   3.3  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   7.6  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 15/64 (23%), Positives = 28/64 (43%)
 Frame = +1

Query: 34  LQNFNQLF*KVNFTMEPKRTALAGPMALTSIKTARKSFAVTNTYIRNAPPTKEIVSVHTS 213
           L N+  L     FTM    T +   + + ++ T R+  +VTN ++ +      +V +   
Sbjct: 32  LPNWTDLVLAGLFTMLIIVTIVGNTLVIAAVITTRRLRSVTNCFVSSLAAADLLVGLAVM 91

Query: 214 MPNV 225
            P V
Sbjct: 92  PPAV 95


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 218 LTLSIDRFLLNKIKY 262
           LT  ID F+LN+I+Y
Sbjct: 1   LTREIDGFVLNRIQY 15


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 496 TNTLLSSYVNGCIKCWK 546
           T ++ +SY NGC++  K
Sbjct: 171 TCSISNSYTNGCVEALK 187


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,146
Number of Sequences: 438
Number of extensions: 3638
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)