Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9d20
         (332 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q55E84 Cluster: EGF-like domain-containing protein; n=1...    33   1.3  
UniRef50_Q5T6B5 Cluster: CUB and Sushi multiple domains 2; n=9; ...    30   8.9  

>UniRef50_Q55E84 Cluster: EGF-like domain-containing protein; n=1;
           Dictyostelium discoideum AX4|Rep: EGF-like
           domain-containing protein - Dictyostelium discoideum AX4
          Length = 975

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
 Frame = +3

Query: 87  SIYLGGKYLLEMDRMNNDVPMANLTGLG*ET----RCFNVTLI 203
           +IYL G YLL  DR+NN +   N++  G  +    +C+N+ ++
Sbjct: 448 TIYLSGSYLLPNDRVNNPIYSINISSSGSSSSNPIQCYNIKVL 490


>UniRef50_Q5T6B5 Cluster: CUB and Sushi multiple domains 2; n=9;
           Euteleostomi|Rep: CUB and Sushi multiple domains 2 -
           Homo sapiens (Human)
          Length = 426

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 107 ISIRNGPYEQ*RAYGEFNWSRLRNTL 184
           I IRNGPYE  R  G F+ S L ++L
Sbjct: 161 IEIRNGPYETSRMMGRFSGSELPSSL 186


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 270,069,226
Number of Sequences: 1657284
Number of extensions: 4198301
Number of successful extensions: 7989
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7989
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 10394654088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)