Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9d19
         (480 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2LCS1 Cluster: ORF845; n=1; Dictyostelium citrinum|Rep...    34   1.9  
UniRef50_A5E617 Cluster: Predicted protein; n=1; Lodderomyces el...    33   2.5  
UniRef50_Q54C10 Cluster: Putative uncharacterized protein; n=1; ...    33   4.4  

>UniRef50_Q2LCS1 Cluster: ORF845; n=1; Dictyostelium citrinum|Rep:
           ORF845 - Dictyostelium citrinum
          Length = 844

 Score = 33.9 bits (74), Expect = 1.9
 Identities = 21/58 (36%), Positives = 33/58 (56%)
 Frame = -3

Query: 196 NNRYIREIKTSTIDYNNETRQLYNSNYETQRVHYVSKLLQY*ITLIVVHKNRTVQRKD 23
           N RY +  K S+ +     +Q  NSNY+T R +++ K LQY ++L      RT +RK+
Sbjct: 273 NQRYQKNKKFSSNNSQQYNKQ--NSNYKTSRQYFIKKRLQY-LSLDRSKVKRTKKRKN 327


>UniRef50_A5E617 Cluster: Predicted protein; n=1; Lodderomyces
           elongisporus NRRL YB-4239|Rep: Predicted protein -
           Lodderomyces elongisporus (Yeast) (Saccharomyces
           elongisporus)
          Length = 301

 Score = 33.5 bits (73), Expect = 2.5
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 73  NIVIILRHNGPVVFHNSNYIVDEFRYCNQLCLF*FHECNGCYEFCIIN 216
           N +++L+ NGP++ H+ NY +     C Q     FH  + C  F   N
Sbjct: 138 NSILVLKCNGPILVHDINYCIVVILQCQQAR---FHNSSNCIVFMAKN 182


>UniRef50_Q54C10 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 540

 Score = 32.7 bits (71), Expect = 4.4
 Identities = 21/50 (42%), Positives = 30/50 (60%)
 Frame = +1

Query: 106 VVFHNSNYIVDEFRYCNQLCLF*FHECNGCYEFCIINSDRIALKNAALDF 255
           + F N+N I++EF+  NQL    F + N CY     NSD++ LK + LDF
Sbjct: 62  IKFENTNSILEEFK--NQL----FPKLNECY-----NSDQVLLKQSNLDF 100


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 357,659,520
Number of Sequences: 1657284
Number of extensions: 5840976
Number of successful extensions: 14106
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14100
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)