Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9d19
         (480 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.5  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    21   5.9  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   5.9  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   5.9  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    21   5.9  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 183 FVKLKQAQLITITKLVNYIIRIMKHNGSIMSQN 85
           F KLKQA++    +  N+I + +K  G I++ N
Sbjct: 479 FEKLKQARMTINLEKSNFIQKEVKFLGHILTIN 511


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
 Frame = -3

Query: 208 CKTHNNRYIREIKTSTI-DYNNETRQLYN-----SNYETQRVHYVSKL 83
           C  H    + ++    I + N++ +QL +       Y+TQ  HY+ K+
Sbjct: 75  CNDHQKVSVEKVIRFLIKERNSDWQQLISVYDPKGEYQTQYAHYLEKI 122


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 155 INCACFNFTNVTVVMSFA 208
           +N  C N + VT+  +FA
Sbjct: 58  LNVCCLNLSIVTIFFNFA 75


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 64  LIVVHKNRTVQRKDHN 17
           L+ +HKN     KDHN
Sbjct: 233 LVNLHKNLVKVAKDHN 248


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
 Frame = -3

Query: 208 CKTHNNRYIREIKTSTI-DYNNETRQLYN-----SNYETQRVHYVSKL 83
           C  H    + ++    I + N++ +QL +       Y+TQ  HY+ K+
Sbjct: 75  CNDHQKVSVEKVIRFLIKERNSDWQQLISVYDPKGEYQTQYAHYLEKI 122


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,883
Number of Sequences: 336
Number of extensions: 1794
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)