Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte9d19
         (480 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75955-16|CAN86627.1|  483|Caenorhabditis elegans Hypothetical p...    27   5.3  
Z72512-1|CAA96663.2|  326|Caenorhabditis elegans Hypothetical pr...    27   9.3  
AF077545-2|AAC26305.3|  356|Caenorhabditis elegans Hypothetical ...    27   9.3  

>Z75955-16|CAN86627.1|  483|Caenorhabditis elegans Hypothetical
           protein R07B7.9b protein.
          Length = 483

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -3

Query: 184 IREIKTSTIDYNNETRQLYNSNYETQRVHYVSKLL 80
           + EI+T+ ID+ N  ++  NSN+ T  +   ++ L
Sbjct: 108 VEEIQTNGIDFQNAEKEKENSNFTTPEMKLKAQTL 142


>Z72512-1|CAA96663.2|  326|Caenorhabditis elegans Hypothetical
           protein R07B5.3 protein.
          Length = 326

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +1

Query: 31  SVLSCFCVLLLK*FNIVIILRHNGPVVFHNSNYIVDEFR--YCNQLCLF*FHECNGCYEF 204
           ++L+ FC  L    +IV +L      V++ SNY    +   +C+   L  F+E N  Y+ 
Sbjct: 93  TILTYFCATLDPAESIVPLL----VAVYYFSNYSSQLYTVLFCSTRTLILFNEKNKIYQL 148

Query: 205 CII 213
           CI+
Sbjct: 149 CIL 151


>AF077545-2|AAC26305.3|  356|Caenorhabditis elegans Hypothetical
           protein H41C03.2 protein.
          Length = 356

 Score = 26.6 bits (56), Expect = 9.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 94  HNGPVVFHNSNYIVDEFRYCNQ 159
           HN   +F+ S+  VD ++ CNQ
Sbjct: 300 HNSFEIFYGSHMAVDNYKICNQ 321


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,740,632
Number of Sequences: 27780
Number of extensions: 147793
Number of successful extensions: 307
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)