Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte9d18
(572 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74028-6|CAI91174.1| 674|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z74028-5|CAA98427.1| 677|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z92812-7|CAB07281.2| 341|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical pr... 28 4.1
X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein ... 28 4.1
AL117204-24|CAB55152.1| 298|Caenorhabditis elegans Hypothetical... 28 5.4
Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z70753-12|CAA94761.2| 585|Caenorhabditis elegans Hypothetical p... 27 9.5
U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical pr... 27 9.5
U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z74028-6|CAI91174.1| 674|Caenorhabditis elegans Hypothetical
protein C14C10.3b protein.
Length = 674
Score = 31.1 bits (67), Expect = 0.58
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 123 AIVRAKSCLAASRQETVARKAARDLFASLSNGEQYITTVQLERRIREI 266
A + K+CL A RQ D F L N + +VQ +++IRE+
Sbjct: 11 ATILNKTCLTAVRQSLKHTDGRFDYFRYLGNDASHAISVQKDQQIREV 58
>Z74028-5|CAA98427.1| 677|Caenorhabditis elegans Hypothetical
protein C14C10.3a protein.
Length = 677
Score = 31.1 bits (67), Expect = 0.58
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 123 AIVRAKSCLAASRQETVARKAARDLFASLSNGEQYITTVQLERRIREI 266
A + K+CL A RQ D F L N + +VQ +++IRE+
Sbjct: 11 ATILNKTCLTAVRQSLKHTDGRFDYFRYLGNDASHAISVQKDQQIREV 58
>Z92812-7|CAB07281.2| 341|Caenorhabditis elegans Hypothetical
protein T03E6.8 protein.
Length = 341
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/60 (21%), Positives = 30/60 (50%)
Frame = -3
Query: 411 HYCLCDRQLVGQMVLMLVRHRLAHLPLLSYRRQENRCLRPLSSVTSYCKSLLSDVRVEPL 232
H LC +V +++ L +H+L L L Y ++ ++ + + +C +++ V + L
Sbjct: 105 HVVLCKSDMVSLVIMQLFKHQLVTLSDLRYTKKFELSVKIIRWLFYFCYLMMAVVAISIL 164
>Z77666-6|CAB01232.1| 1321|Caenorhabditis elegans Hypothetical
protein K08E7.9 protein.
Length = 1321
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 390 GDHINSNGTLRTSHDLEEDVPDRCSNEEIRNLT 488
GD+I+SNG ++ + D +E+V ++ S ++ T
Sbjct: 37 GDNIDSNGEIKITRDAKEEVVNKVSIPQLYRYT 69
>X65054-1|CAA46190.1| 1321|Caenorhabditis elegans P-glycoprotein A
protein.
Length = 1321
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 390 GDHINSNGTLRTSHDLEEDVPDRCSNEEIRNLT 488
GD+I+SNG ++ + D +E+V ++ S ++ T
Sbjct: 37 GDNIDSNGEIKITRDAKEEVVNKVSIPQLYRYT 69
>AL117204-24|CAB55152.1| 298|Caenorhabditis elegans Hypothetical
protein Y116A8C.37 protein.
Length = 298
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3
Query: 309 NRCLRPLSSVTSYCKSLLSDVRVEPLLCIVHHSTNWQ 199
N+ + +T YC +L D LL V+H NW+
Sbjct: 208 NKKVESAVGMTEYCLEILPDGCSNSLLTTVYHMHNWR 244
>Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical
protein F57G4.1 protein.
Length = 838
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 483 LTVDNLVSAAVDYCQGELPLVSYELTLTD 569
LTV+N VS D C + L +Y LT +D
Sbjct: 475 LTVENEVSFGFDCCDVDTNLCTYTLTFSD 503
>Z70753-12|CAA94761.2| 585|Caenorhabditis elegans Hypothetical
protein F40F9.5 protein.
Length = 585
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 505 DTRLSTVKLRISSFEHLSGTSSSRSCEVRSVPLLFM 398
DTRL +V+ R S+F L+ T C V P+LF+
Sbjct: 34 DTRLFSVRRR-STFHALNETKGVWCCPVNVEPILFL 68
>U58745-2|AAU05593.1| 569|Caenorhabditis elegans Hypothetical
protein C10G6.1b protein.
Length = 569
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +3
Query: 393 DHINSNGTLRTSHDLEEDVPDRCSNEEIRNLTVDNLVSAAVDYCQGELPLVSYE 554
DH+ RT HDL R +EE+RN V ++ QG L + E
Sbjct: 14 DHLMQKNGRRTIHDLSCQFGARGFSEEMRN-AVGTTQEGLTEFLQGHPSLFTVE 66
>U58745-1|AAB00620.2| 574|Caenorhabditis elegans Hypothetical
protein C10G6.1a protein.
Length = 574
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +3
Query: 393 DHINSNGTLRTSHDLEEDVPDRCSNEEIRNLTVDNLVSAAVDYCQGELPLVSYE 554
DH+ RT HDL R +EE+RN V ++ QG L + E
Sbjct: 14 DHLMQKNGRRTIHDLSCQFGARGFSEEMRN-AVGTTQEGLTEFLQGHPSLFTVE 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,658,774
Number of Sequences: 27780
Number of extensions: 222146
Number of successful extensions: 563
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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